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MicroRNA works with Ago2 protein to regulate blood cell development
July 27, 2007
MicroRNAs became the stars of the RNA universe when, in 2001, scientists found that these short RNAs can control whether or not genes are expressed. This month, scientists at Rockefeller University and the Wellcome Trust cast new light on the genesis of these key biological regulators and how they carry out their function. These provocative new findings were reported online July 12 in the journal Genes & Development. While microRNAs are made in large amounts in every cell from plants to humans, Dónal O'Carroll, a research associate in Alexander Tarakhovsky's lab at The Rockefeller University, has focused on understanding how they regulate the development of one particular system: the hematopoietic system.
"This is a system where similar kinds of stem cells give rise to all the different types of blood cells in the body, so you can definitively address whether microRNAs are involved in the processes by which they specialize and develop," says O'Carroll.
Instead of making proteins, these snippets of RNA repress their synthesis. They bind to messenger RNAs (mRNAs) - the blueprints for proteins - and either target them for destruction or inhibit their protein-making output. In order for microRNA to find its target mRNA, it needs the help of the protein Ago2, the only member of the Argonaute family of proteins that has a "slicer" function: That is, once microRNA binds with its target, it cleaves it, effectively stopping mRNA's ability to make proteins.
Since the "slicer" activity of Ago2 would be the most efficient way of regulating microRNA function, O'Carroll wanted to see whether it plays a role in the development of blood cells.
In the bone marrow of adult mice - where their blood stem cells reside - O'Carroll conditionally knocked out the gene that encodes Ago2. Two months later, O'Carroll observed that they had developed anemia and enlarged spleens, and noted that although the stem cells still gave rise to all blood cell types, the development of two of them was severely affected: B lymphocytes, which contribute to the production of antibodies, and red blood cells.
When he looked at the Ago2-deficient mice's blood cells, he also saw that the microRNA levels, though not zero, were much reduced, indicating that Ago2 is essential for microRNA homeostasis during the early development of blood cells.
To specifically test the importance of Ago2's "slicer" activity, O'Carroll then genetically reconstituted the Ago2-deficient stem cells with either wild type Ago2 or a modified version of it that rendered the "slicer" activity inactive. A few weeks later, both conditions - the anemia and the enlarged spleen - in both groups of mice were cured, suggesting that this feature of Ago2 makes only a minor contribution to its biological function. The finding was surprising since the "slicer" function is unique to Ago2.
"At least within this system, 'slicer' activity doesn't have a role in the execution of microRNA function, but Ago2 does have a special role in the maintenance of microRNA levels," says O'Carroll, who recently accepted a position at the European Molecular Biology Laboratory in Rome.
Within the blood system, low levels of microRNA are not life-threatening during development but do have a distinct effect on different blood cell lineages.
"The results have caused us to think about the differential sensitivity of distinct developmental processes to microRNA levels," says Tarakhovsky. "It remains to be seen to what extent specialized functions of developing cells in the blood system depend on microRNA."
Rockefeller University
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MicroRNAs: From Basic Science to Disease Biology
by Krishnarao Appasani (Editor), Sidney Altman (Editor), Victor R. Ambros (Editor)
MicroRNAs (miRNAs) are RNA molecules, conserved by evolution, that regulate gene expressions and their recent discovery is revolutionising both basic biomedical research and drug discovery. Expression levels of MiRNAs have been found to vary between tissues and with developmental stages and hence evaluation of the global expression of miRNAs potentially provides opportunities to identify regulatory points for many different biological processes. This wide-ranging reference work, written by leading experts from both academia and industry, will be an invaluable resource for all those wishing to use miRNA techniques in their own research, from graduate students, post-docs and researchers in academia to those working in R&D in biotechnology and pharmaceutical companies who need to understand...
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microRNA: Biology, Function & Expression (Nuts & Bolts series)
by Neil J. Clarke; Philippe Sanseau (Author)
Providing a comprehensive overview of a fast-emerging field, this volume dedicated to the biological role of microRNAs (miRNAs) discusses methods for identifying and characterizing their functions and looks at potential applications of microRNA research in medicine and pharmacology. miRNAs are small, noncoding RNA molecules that appear to regulate gene expression. Found in plant and animal species and possibly traceable back to ancient forms of life, miRNAs are now estimated to regulate a third or more of genes in the human genome. The Editors have included material from some of the very best, most active and upcoming researchers in the field, to provide the reader with a rounded overview of the biology, function and expression of miRNAs. The chapters are grouped according to the...
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Current Perspectives in microRNAs (miRNA)
by Shao-Yao Ying (Editor)
Nearly 97 percent of the human genome is the non-coding DNA, which varies from one species to another, and changes in these sequences are frequently noticed to manifest clinical and circumstantial malfunction. Numerous non-protein-coding genes are recently found to encode microRNAs, which are responsible for RNA-mediated gene silencing through RNA interference (RNAi)-like pathways. MicroRNAs (miRNAs), small single-stranded 17-25 nucleotide RNAs capable of interfering with intracellular messenger RNAs (mRNAs) that contain either complete or partial complementarity, are useful for the design of new therapies against cancer polymorphism and viral mutation. Currently over 1000 native miRNA species found in vertebrates and many more new miRNA homologs continue to be identified; however, most...
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MicroRNA Protocols (Methods in Molecular Biology)
by Shao-Yao Ying (Editor)
MicroRNA Protocols provides diverse, novel, and useful descriptions of miRNAs in several species, including plants, worms, flies, fish, chicks, mice, and humans. These include some useful adaptations and applications that could be relevant to the wider research community who are already familiar with the identification of miRNAs. This volume will stimulate the reader to explore diverse ways to understanding the mechanism in which miRNAs facilitate the molecular aspects of the biomedical research.
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MicroRNA Interference Technologies
by Zhiguo Wang (Author)
MicroRNAs (miRNAs), endogenous noncoding regulatory mRNAs of around 22-nucleotides long, have rapidly emerged as one of the key governors of the gene expression regulatory program in cells of varying species, with ever-increasing implications in the control of the fundamental biological processes and in the pathogenesis of adult humans. The exciting findings in this field have inspired us with a premise and a promise that miRNAs will ultimately be taken to the heart for therapy of human disease. While miRNAs have been considered potential therapeutic targets for disease treatment, it remains obscured what strategies we can use to achieve the goal. In the past years, we have witnessed a rapid evolving of many creative, innovative, inventive strategies and methodologies pertinent to...
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MicroRNA Methods, Volume 427 (Methods in Enzymology)
by John J. Rossi (Editor)
MicroRNAs (miRNA) are tiny bits of genetic material that were unknown nearly 10 years ago but now represent an exciting field of study in biology. Upon their discovery, researchers revealed for the first time a new mechanism by which microRNA can stop the function of messenger RNA (mRNA) by literally cutting it in half, interfering with the normal function of specific messenger RNAs in gene expression.
This "expression" of genes that code for essential proteins is essentially what controls whether a cell turns into a liver, lung, or brain cell, for example. Understanding what activates this process - or stops it - is a key to understanding the biological process and builds a foundation for advances in medicine and other fields. This volume in Methods in Enzymology presents...
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MicroRNAs and Cancer (Current Cancer Research)
by Carlo Croce (Editor)
The aim of this book is to reveal to a large spectrum of audience including biologists and physicians the extent of the microRNAs revolution in the cancer society. Alterations in miRNA genes play a critical role in the pathophysiology of many, perhaps all, human cancer: cancer initiation and progression can involve microRNAs (miRNAs) - small non-coding RNAs that can regulate gene expression. At the present time, the main mechanism of microRNAs alteration in cancer cells seems to be represented by aberrant gene expression, characterized by abnormal levels of expression for mature and/or precursor miRNA sequences in comparison with the corresponding normal tissues. Loss or amplification of miRNA genes has been reported in a variety of cancers and altered patterns of miRNA expression may...
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Microrna Profiling in Cancer: A Bioinformatics Prospective
by Yuriy Gusev (Editor)
The recent discovery of microRNAs - a new class of non-coding RNAs - has revolutionized modern biomedical sciences. This book presents current advances in the emerging interdisciplinary field of microRNA research of human cancers from a unique perspective of quantitative sciences: bioinformatics, computational and systems biology and mathematical modeling. This volume contains adaptations and critical reviews of the recent state-of-the-art studies, ranging from technological advances in microRNA detection and profiling, clinically oriented microRNA profiling in several human cancers, to a systems biology analysis of global patterns of microRNA regulation of signaling and metabolic pathways. Interactions with transcription factor regulatory networks and mathematical modeling of miRNA...
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Micrornas in Development and Cancer
by Frank J Slack (Editor)
MicroRNAs have recently emerged as key regulators of gene expression during development and are frequently misexpressed in human disease states, in particular cancer. These 22-nucleotide-long transcripts act to promote or repress cell proliferation, migration and apoptosis during development, all of which are processes that go awry in cancer. Thus, microRNAs have the ability to behave like oncogenes or tumor suppressors. In addition, their small size and molecular properties make them amenable as targets and therapeutics in cancer treatment. This book goes into detail on how microRNAs represent a paradigm shift in thinking about gene regulation during development and disease, and provide the oncologist with a potentially powerful new battery of agents to diagnose and treat cancer.
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Microchip Tracks MicroRNAs.: An article from: Analytic Separations News
by Business Communications Company, Inc. (Publisher)
This digital document is an article from Analytic Separations News, published by Business Communications Company, Inc. on July 1, 2004. The length of the article is 625 words. The page length shown above is based on a typical 300-word page. The article is delivered in HTML format and is available in your Amazon.com Digital Locker immediately after purchase. You can view it with any web browser.
Citation Details Title: Microchip Tracks MicroRNAs. Publication: Analytic Separations News (Newsletter) Date: July 1, 2004 Publisher: Business Communications Company, Inc. Volume: 2 Issue: 2
Distributed by Thomson Gale
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