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Molecular probe 'paints' cancer cells in living animals, Stanford researchers find
September 10, 2007
STANFORD, Calif. - Researchers at the Stanford University School of Medicine have developed a molecular probe that sets aglow tumor cells within living animals. Their goal is to use the probe to improve the diagnosis and treatment of cancer and other diseases. The probe's main ingredient is a molecule that labels active proteases - protein-destroying enzymes - that run amok in cancerous cells. The molecule is normally invisible to the naked eye but it carries a fluorescent tag that lights up when it binds to the protease. The tag beams out near-infrared light that passes through skin and is detectable with a special camera. The use of the imaging technique in mice is described in a study to be published in the Sept. 9 advance online issue of Nature Chemical Biology.
"Nowadays the detection of cancer, breast cancer for instance, is normally done by mammography, using X-rays - which might actually increase your risk of cancer. We think these probes may ultimately provide a less harmful, noninvasive method of detecting cancer," said the article's lead author Galia Blum, PhD, a postdoctoral scholar in the laboratory of Matthew Bogyo, PhD, assistant professor of pathology.
And that's just for starters.
"It's neat. The next generation of our experiments will apply the probes during surgery," said Bogyo, the study's senior author. "It would be nice to 'paint' it on tissues so you could distinguish between tumor and non-tumor."
A key advantage of this enzyme-targeting molecule is its size. About 100 times smaller than other molecular imaging reporters, it can easily slip across the cell membrane and enter living cells. It can also move through the animal quickly, which opens up the possibility of using the technique to light up tumors while surgery is in progress.
"Unlike other enzyme-targeting molecules, it's very specific, sticks to where it binds and does it all very rapidly - in 30 minutes or less," Bogyo said.
And unlike most other molecular probes, this type identifies only active enzymes. "We went one step beyond just telling if the enzymes are there. We can answer the question, 'Are they active"' That's important because an accumulation of inactive enzymes doesn't necessarily indicate disease," Blum said.
Bogyo, Blum and colleagues designed the probe to bind to a subset of a family of proteases called cysteine cathepsins, which are more active in several types of cancer as well as other diseases. Now they are tinkering with the probe's configuration in an effort to create a variant that recognizes the enzymes involved in apoptosis, the process of cell death. This could ultimately allow researchers and doctors to visualize response to chemotherapy in tumors, Bogyo said.
And because other diseases besides cancer involve hyped-up proteases - such as Alzheimer's, arthritis, atherosclerosis and osteoporosis - the approach might be of use in diagnosing and treating them as well.
The work went surprisingly smoothly because of Blum's background in chemistry as well as biology. Using her chemistry skills, she created the probes. Then she switched to biology mode and tested them. When she discovered that an earlier version of the probe worked great in tissue culture but decomposed on contact with mouse blood, she was able to tweak the molecule's structure to survive inside a living animal.
In addition to the potential health-care applications, the approach provides a valuable research tool, the researchers said. "It allows you to see exactly where enzymes are active within living animals," said Bogyo.
The Stanford researchers' ultimate goal is to test it in humans, though they'll complete more testing in animals before requesting permission from the U.S. Food and Drug Administration to conduct a human trial. "Since there are currently no fluorescent imaging agents in use in humans, the approval process is likely to require significantly more preclinical data," Bogyo said.
In preparation, they are working with James Basilion, PhD, associate professor of biomedical engineering at Case Western Reserve University, who is using the probe in surgical procedures in animals. They are now testing the probe's ability to reveal the presence of glioma tumor cells during brain surgery in mice.
"Because glioma tumor tissue looks nearly identical to normal tissue, it's very difficult for surgeons to remove every last bit of it," said Bogyo. "We think this will help."
Stanford University Medical Center
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Bioconjugation Protocols: Strategies and Methods (Methods in Molecular Biology)
by Christof M. Niemeyer (Editor)
Expert laboratorians update the classic bioconjugation methods and introduce valuable new techniques that go beyond pure biomedical applications to include elements from advanced organic synthesis, molecular biology, and materials science. These readily reproducible methods cover the preparation of protein conjugates using covalent and noncovalent conjugation, the synthesis of nucleic acid conjugates using a variety of labeling techniques, and approaches to semisynthetic conjugates of proteins. Additional chapters address the biofunctionalization of inorganic surfaces, including the on-chip synthesis of peptide nucleic acids to generate microarrays for the high-throughput analysis of RNA and DNA, gold nanaoparticles, and carbon nanotube probes for atomic force microscopy.
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Molecular Beacons: Signalling Nucleic Acid Probes, Methods, and Protocols (Methods in Molecular Biology)
by Andreas Marx (Editor), Oliver Seitz (Editor)
Significant DNA sequence data has been made availabe by several important genome projects. We clearly live in an exciting era, in which the allocation of functions to a mere string of the four letters in the code of life plays a major if not the predominant role of ongoing and future research. In functional genomics techniques are required that allow to examine the occurrence of gene products (be it RNA or protein material) and their interplay with other gene products, if possible, in real time. Again, once an important function has been identified there will be demands to trace or screen that function in in vitro and in vivo systems. For example, it may be necessary to detect dissimilarities in RNA expression between individuals or it may be required to detect pathogenes as rapid as...
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Molecular Imaging with Reporter Genes (Cambridge Molecular Imaging Series)
by Sanjiv S. Gambhir (Author), Shahriar S. Yaghoubi (Author)
Reporter genes have been used for several decades to study regulation of gene expression in vivo. However, it was little more than a decade ago that a new class of reporter genes was developed for imaging molecular events within living subjects. By following the interactions of protein molecules, researchers can resolve the complex chemical pathways that living cells utilize. This book focuses on this group of imaging reporter genes, starting with detailed descriptions of all reporter genes from different imaging modalities, including optical, MRI, and radionuclide-based imaging. Key scientists in the field explain how to enhance reporter gene imaging utility through instrumentation and the various applications of this technology. This is the first comprehensive book on all aspects of...
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Selected Methods for Antibody and Nucleic Acid Probes (Molecular Probes of the Nervous System, Vol 1)
by S. Hockfield (Author), S. Carlson (Author), C. Evans (Author), P. Levitt (Author), J. Pintar (Contributor)
A basic manual for individuals beginning to use antibody or nucleic acid probes, providing a sufficient introduction to each technique so that readers may then make use of methods published in journals and other primary sources. Special emphasis is placed on techniques of particular importance to ne
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Protocols for Nucleic Acid Analysis by Nonradioactive Probes (Methods in Molecular Biology)
by Elena Hilario (Editor), John MacKay (Editor)
Protocols for Nucleic Acid Analysis by Non-radioactive Probes, Second Edition provides a firm background on the basic preparative protocols required for the analysis of nucleic acids by nonradioactive methods. Presenting the methodologies using amazing new applications, this volume offers guide chapters on nucleic acid extractions, preparation of nucleic acid blots, and labeling of nucleic acids with nonradioactive haptens. New fluorescent techniques such as Real Time PCR and microarrays are also included, allowing users to get a nonradioactive protocol implemented in the laboratory with minimum adaptation required and fastest time to results. The protocols follow the successful Methods in Molecular Biology™ series format, each offering step-by-step laboratory instructions, an...
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Fluorescent Energy Transfer Nucleic Acid Probes: Designs And Protocols (Methods in Molecular Biology) (Methods in Molecular Biology)
by Vladimir V. Didenko (Editor)
The first comprehensive treatment of energy transfer (ET) nucleic acid probes. Hands-on experts thoroughly describe all the major probes, both fluorescence resonance energy transfer (FRET)-based and non-FRET-based, and provide a complete set of techniques to monitor DNA and RNA reactions, including hybridization, amplification, cleavage, folding, and associations with proteins, other molecules, and metal ions. Optimal design strategies for customized ET probes are presented, as well as techniques for distance determination in protein-DNA complexes and the detection of topological DNA alterations, mutations, DNA breaks and single nucleotide polymorphisms. Merging work on nanotechnology, and fluorescent probes, authors describe in detail the design and application of ET-using molecular...
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BUSINESSWOMAN INVESTS WITH ZEAL IN GIRLS, WOMEN.(Business)(Molecular Probes co-founder now offers her talent and resources to charities she loves): An article from: The Register-Guard (Eugene, OR)
by Thomson Gale (Publisher)
This digital document is an article from The Register-Guard (Eugene, OR), published by Thomson Gale on October 7, 2005. The length of the article is 2050 words. The page length shown above is based on a typical 300-word page. The article is delivered in HTML format and is available in your Amazon.com Digital Locker immediately after purchase. You can view it with any web browser.
Citation Details Title: BUSINESSWOMAN INVESTS WITH ZEAL IN GIRLS, WOMEN.(Business)(Molecular Probes co-founder now offers her talent and resources to charities she loves) Publication: The Register-Guard (Eugene, OR) (Newspaper) Date: October 7, 2005 Publisher: Thomson Gale Page: a1
Distributed by Thomson...
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Gene Probes: Principles and Protocols (Methods in Molecular Biology)
by Marilena Aquino do Muro (Editor), Ralph Rapley (Editor)
CABI Bioscience UK Centre, Surrey, UK. Presents the principles for gene probe design, labeling, detection, target format, and hybridization conditions together with detailed protocols, practical hints, and tips. For researchers. Outline format.
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State's stimulus sparks biotech firm.(Government)(The governor unveils a $1.45 million subsidy package to help Molecular Probes expand and create jobs): ... from: The Register-Guard (Eugene, OR)
by The Register Guard (Publisher)
This digital document is an article from The Register-Guard (Eugene, OR), published by The Register Guard on February 2, 2005. The length of the article is 815 words. The page length shown above is based on a typical 300-word page. The article is delivered in HTML format and is available in your Amazon.com Digital Locker immediately after purchase. You can view it with any web browser.
Citation Details Title: State's stimulus sparks biotech firm.(Government)(The governor unveils a $1.45 million subsidy package to help Molecular Probes expand and create jobs) Publication: The Register-Guard (Eugene, OR) (Newspaper) Date: February 2, 2005 Publisher: The Register Guard Page: a1
Distributed by Thomson...
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Protocols for Nucleic Acid Analysis by Nonradioactive Probes (METHODS IN MOLECULAR BIOLOGY (PAPERBACK/SPIRAL))
by Peter G. Isaac (Author)
Nickerson Biochem Ltd., Cambridge, U.K. Methods in Molecular Biology, Volume 28. Tried and tested laboratory methods for advanced researchers in molecular biology. 34 international contributors, including 10 U.S. Plastic spiral binding.
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