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Pol3 mutation disrupts organ growth
November 27, 2007
The cellular mechanism that turns DNA into all of the thousands of proteins that make up a human body is itself both intricate and interesting. A key player in the process-called transcription-is the enzyme RNA polymerase III. Work published online this week in the open-access journal PLoS Biology reports that a mutation of this enzyme prevents cell division, but surprisingly, only affects the development of specific organs. It may also have a therapeutic application against cancer. A team of researchers led by Dr. Michael Pack, at the University of Pennsylvania, investigated the mutation in RNA polymerase III of the zebrafish, an animal model system that is increasingly being used to study human development and disease. Seventeen different subunits combine to form the RNA polymerase III enzyme in organisms as diverse as yeast, zebrafish, and humans. The mutation they studied, which is called slim jim (because mutant fish are comparatively thin due to developmental differences), affects only one of these subunits. This subtle change is enough to prevent cells from dividing, because with disrupted transcription machinery, a cell is unable to make enough protein to give rise to two daughter cells.
To further study how the slim jim mutation affected the 17 subunit RNA Polymerase III complex, Dr. Pack's laboratory collaborated with Dr. Richard Maraia. Dr. Maraia's laboratory, at the National Institutes of Health, engineered a similar mutation in the fission yeast Sacchromyces pombe. These experiments showed that the mutation's effect arises because the mutated subunit cannot interact properly with one of its neighbors in the yeast RNA Polymerase III complex. Remarkably, Dr. Pack's lab showed that when high levels of this interacting subunit are experimentally induced in zebrafish, the slim jim defects were reversed. These experiments are interesting because they show how highly conserved the transcriptional mechanism and its regulation have been throughout animal evolution.
The slim jim mutation only has a strong effect in certain zebrafish tissues, such as the intestine, whereas other organs, including the heart, are relatively unaffected. Dr. Pack explained that this is likely to derive from the different developmental patterns of each organ. Tissues that require cell division to continue late into development or in the adult-and therefore have higher demands for protein production-are the most severely affected.
This provides hope that disrupting this gene in cancer patients may prove beneficial. Cancer is a disease caused by unstoppable cell division, and a therapy that decreases the efficiency of RNA Polymerase III would have a strong effect specifically on cancer growth, which has very high demands for protein production.
Public Library of Science
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Related Polymerase Current Events and Polymerase News Articles Polymerase Current Events and Polymerase News RSS GEN reports on enhancing the applications of qPCR Quantitative polymerase chain reaction (qPCR) technology is experiencing a surge of interest and rapid expansion as a result of advances such as instrumentation that pushes capacity to 1,536 wells and optimization-free multiplexing.
Wild pigs and deer do not spread GM corn via feces or accumulate transgenic residues in meat Deer stew, roast of wild boar, venison ragout - come fall, all varieties of game are in season for gourmets. However, ever since the worldwide surge in genetically modified corn, critical consumers' appetites have abated somewhat.
Catching a killer one spore at a time A workshop at the Smithsonian Tropical Research Institute in Panama has dramatically improved the ability of conservationists and regulatory agencies to monitor the spread of chytridiomycosis-one of the deadliest frog diseases on Earth.
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How RNA polymerase II gets the go-ahead for gene transcription All cells perform certain basic functions. Each must selectively transcribe parts of the DNA that makes up its genome into RNAs that specify the structure of proteins.
Frozen assets: NIAID researchers turn to unique resource for clues to norovirus evolution A search through decades-old frozen infant stool samples has yielded rich dividends for scientists from the National Institute of Allergy and Infectious Diseases (NIAID), part of the National Institutes of Health.
Gut Ecology in Transplant Patients Small-bowel transplant patients with an ileostomy -- an opening into their small bowel -- have a very different population of bacteria living in their gut than patients whose ileostomy has been closed, researchers from UC Davis and Georgetown University Medical Center have found.
NIST calculations may improve temperature measures for microfluidics If you wanted to know if your child had a fever or be certain that the roast in the oven was thoroughly cooked, you would, of course, use a thermometer that you trusted to give accurate readings at any temperature within its range.
Test developed at UQ diagnosed Australia's first swine flu victim When the first cases of H1N1 Influenza (swine flu) were reported in Mexico in April, UQ researchers got to work developing a test to diagnose the virus.
Bird flu leaves the nest -- adapting to a new host Current research suggests that viral polymerase may provide a new therapeutic target for host-adapted avian influenza. More Polymerase Current Events and Polymerase News Articles
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The Polymerase Chain Reaction
by Kary B. Mullis (Editor), Francois Ferre (Editor), Richard A. Gibbs (Editor), J.D. Watson (Editor)
This is the first comprehensive handbook on polymerase chain reaction (PCR). Edited by the inventor of PCR and the 1993 Nobel Prize winner in Chemistry, Kary Mullis, and two prominent experts in the field. It provides the most up-to-date methodological protocols from the world's leading laboratories, as well as exciting new techniques and enhanced applications not yet available in book form. Nearly forty chapters will inform the novice and experienced PCR user on how to optimize their results. The applications chapters are quite unique, with the foremost researchers providing not only protocols, but descriptions of how PCR has revolutionized their particular field. Future enhancements of PCR as well as new potential uses are discussed. Readers will learn how PCR has changed the...
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"Flexi DNA Polymerase - GoTaq Polymerases and Master Mixes, Promega - Model PAM8298 - Each"
by Promega
Flexi DNA Polymerase - GoTaq Polymerases and Master Mixes, Promega - Model PAM8298 - Each : DNA polymerase is a Taq polymerase in a formulation that provides a robust performance in a variety of applications. It is supplied with two reaction buffers, one of which contains a green dye that separates. The colorless buffer is recommended for applic
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RNA Polymerases as Molecular Motors (RSC Biomolecular Sciences)
by Henri Buc (Editor), Terence Strick (Editor)
This book, written by expert scientists in the field, analyses how these diverse fields of research interact on a specific example - RNA polymerase. The book concentrates on RNA polymerases because they play a central role among all the other machines operating in the cell and are the target of a wide range of regulatory mechanisms. They have also been the subject of spectacular advances in their structural understanding in recent years, as testified by the attribution of the Nobel prize in chemistry in 2006 to Roger Kornberg.
The book focuses on two aspects of the transcription cycle that have been more intensively studied thanks to this increased scientific cooperation - the recognition of the promoter by the enzyme, and the achievement of consecutive translocation steps...
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![Incorporating polymerase chain reaction-based identification, population characterization, and quantification of microorganisms into aerosol science: A ... [An article from: Atmospheric Environment]](http://ecx.images-amazon.com/images/I/51C4M48N0CL._SL160_.jpg)
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Incorporating polymerase chain reaction-based identification, population characterization, and quantification of microorganisms into aerosol science: A ... [An article from: Atmospheric Environment]
by J. Peccia (Author), M. Hernandez (Author)
This digital document is a journal article from Atmospheric Environment, published by Elsevier in 2006. The article is delivered in HTML format and is available in your Amazon.com Media Library immediately after purchase. You can view it with any web browser.
Description: The quantity, identity, and distribution of biomass in indoor and outdoor aerosols are poorly described. This is not consistent with the current understanding of atmospheric chemistry or the microbiological characterization of aquatic and terrestrial environments. This knowledge gap is due to both difficulties in applying contemporary microbiological techniques to the low biomass concentrations present in aerosols, and the traditional reliance of aerosol researchers on culture-based techniques-the quantitative...
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The Polymerase Chain Reaction
by Kary B. Mullis (Editor), Francois Ferre (Editor), Richard A. Gibbs (Editor)
Edited by the inventor of PCR and two prominent experts in PCR techniques, this first comprehensive handbook on the Polymerase Chain Reaction has the most up to date methodological protocols from the world's leading laboratories. Included are exciting new techniques and enhanced methods, previously unavailable in book form, that show the novice and experienced PCR user exactly how they can optimize their results. The applications chapters are quite unique, with the foremost researchers providing not only protocols, but explaining why PCR has revolutionized their particular field. Future enhancements of PCR as well as new potential uses are discussed. Readers will learn how PCR has changed the face of diagnostic testing, cancer research, genetics, forensics, plant biology, DNA sequencing,...
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Viral Polymerases and Related Proteins, Volume 275 (Methods in Enzymology)
by John N. Abelson (Editor), Melvin I. Simon (Editor), Lawrence C. Kuo (Editor), David B. Olsen (Editor), Steven S. Carroll (Editor)
The critically acclaimed laboratory standard for more than forty years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Since 1955, each volume has been eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. More than 270 volumes have been published (all of them still in print) and much of the material is relevant even today--truly an essential publication for researchers in all fields of life sciences.
Key Features * Expression, purification, and characterization * Activity assays * Kinetic and screening * Design and analysis of substrates and inhibitors * Molecular and structural characterizations
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The Polymerase Chain Reaction (PCR) for Human Viral Diagnosis (Pcr for Human Viral Diagnosis)
by Jonathan P. Clewley (Author)
The polymerase chain reaction (PCR) is the most sensitive method for revealing the presence of otherwise undetectable quantities of the genome of RNA or DNA of human viruses. The Polymerase Chain Reaction (PCR) for Human Viral Diagnosis addresses the urgent need to use this revolutionary technology in reference and routine diagnostic laboratories. It informs the molecular biologist of the most appropriate clinical uses for PCR and educates the clinician and medical virologist about the subtleties and benefits of gene amplification. The reader is given an understanding and appreciation of the principles of PCR and how, why, and where it should be applied. The book explains the principles behind PCR and its role in the diagnostic and public health laboratory. The application of PCR to the...
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"Green Reaction Buffer - GoTaq Polymerases and Master Mixes, Promega - Model PAM7911 - Each (20 ML)"
by Promega
Green Reaction Buffer - GoTaq Polymerases and Master Mixes, Promega - Model PAM7911 - Each (20 ML) : DNA polymerase is a Taq polymerase in a formulation that provides a robust performance in a variety of applications. It is supplied with two reaction buffers, one of which contains a green dye that separates. The colorless buffer is recommended for applic
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![Gene structure, purification and characterization of DNA polymerase @b from Xiphophorus maculatus [An article from: Comparative Biochemistry and Physiology, Part C]](http://ecx.images-amazon.com/images/I/51A51TBEEML._SL160_.jpg)
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Gene structure, purification and characterization of DNA polymerase @b from Xiphophorus maculatus [An article from: Comparative Biochemistry and Physiology, Part C]
by L.P. Oehlers (Author), S.J. Heater (Author), J.D. Rains (Author), M.C. Wells (Author)
This digital document is a journal article from Comparative Biochemistry and Physiology, Part C, published by Elsevier in 2004. The article is delivered in HTML format and is available in your Amazon.com Media Library immediately after purchase. You can view it with any web browser.
Description: Cloning of the Xiphophorus maculatus Pol@b gene and overexpression of the recombinant Pol@b protein has been performed. The organization of the XiphPol@b introns and exons, including intron-exon boundaries, have been assigned and were found to be similar to that for human Pol@b with identical exon sizes except for exon XII coding for an additional two amino acid residues in Xiphophorus. The cDNA sequence encoding the 337-amino acid X. maculatus DNA polymerase @b (Pol@b) protein was...
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Hepatitis B: Hepatitis B virus, Hepatitis, Hepatitis B vaccine, DNA polymerase, Hepatitis B in China, Transfusion transmitted infection, Hepatocellular carcinoma, Cirrhosis, Hepatitis D
by John McBrewster (Editor), Frederic P. Miller (Editor), Agnes F. Vandome (Editor)
Hepatitis B - Hepatitis B virus, Hepatitis, Hepatitis B vaccine, DNA polymerase, Hepatitis B in China, Transfusion transmitted infection, Hepatocellular carcinoma, Cirrhosis, Hepatitis D, Polyarteritis nodosa, Lamivudine
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