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Evolving complexity out of 'junk DNA'
February 12, 2008
The study, published today in Proceedings of the National Academy of Sciences, USA, claims to have solved this scientific riddle by analysing the genomics of primitive living fishes such as sharks and lampreys and their spineless relatives, such as the sea squirts. Vertebrates - animals such as humans that possess a backbone - are the most anatomically and genetically complex of all organisms, but explaining how they achieved this complexity has vexed scientists since the conception of evolutionary theory.
Alysha Heimberg of Dartmouth College and her colleagues showed that microRNAs, a class of tiny molecules only recently discovered residing within what has usually been considered 'junk DNA', are hugely diverse in even the most lowly of vertebrates, but relatively few are found in the genomes of our invertebrate relatives.
She explained: "There was an explosive increase in the number of new microRNAs added to the genome of vertebrates and this is unparalleled in evolutionary history."
Co-author, Dr Philip Donoghue of Bristol University's Department of Earth Sciences continued: "Most of these new genes are required for the growth of organs that are unique to vertebrates, such as the liver, pancreas and brain. Therefore, the origin of vertebrates and the origin of these genes is no coincidence."
Dr Kevin Peterson of Dartmouth College said: "This study not only points the way to understanding the evolutionary origin of our own lineage, but it also helps us to understand how our own genome was assembled in deep time."
University of Bristol
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Related Genomics Current Events and Genomics News Articles Genomics Current Events and Genomics News RSS Pathogen protection and virulence: Dark side of fungal membrane protein revealed Researchers at the Virginia Bioinformatics Institute (VBI) at Virginia Tech and Montana State University have discovered a fungal protein that plays a key role in causing disease in plants and animals and which also shields the pathogen from oxidative stress.
Study sheds light on evolution of human complexity A painstaking analysis of thousands of genes and the proteins they encode shows that human beings are biologically complex, at least in part, because of the way humans evolved to cope with redundancies arising from duplicate genes.
TGen seeks emergency FDA approval of new swine flu test The Phoenix-based non-profit Translational Genomics Research Institute (TGen) announced today that, along with a business collaborator, it will submit a request to the U.S. Food and Drug Administration for emergency use of a new test to diagnose the 2009 H1N1 swine flu virus.
Will genomics help prevent the next pandemic? This week, the Public Library of Science, an open-access publisher, presents the "Genomics of Emerging Infectious Disease," a collection of essays, perspectives, and reviews that explores how genomics-with all its associated tools and techniques-can provide insights into our understanding of emerging infectious disease.
Standards for a new genomic era A team of geneticists at Los Alamos National Laboratory, together with a consortium of international researchers, has recently proposed a set of standards designed to elucidate the quality of publicly available genetic sequencing information.
Exon-skipping drug prevents muscle wasting, maintains muscle function in dystrophin deficient mice An exon skipping PPMO has demonstrated dramatic effects in the prevention and treatment of severely affected, dystrophin and utrophin-deficient mice, preventing severe deterioration of the treated animals and extending their lifespan.
Time in a bottle: Scientists watch evolution unfold A 21-year Michigan State University experiment that distills the essence of evolution in laboratory flasks not only demonstrates natural selection at work, but could lead to biotechnology and medical research advances, researchers said.
TraDIS technique tackles typhoid For the first time, researchers are able to look at the need for every gene in a bacterial cell in a single experiment. The new method will transform the study of gene activity and the search for weaknesses in bacterial armouries.
Whale-sized genetic study largest ever for southern hemisphere humpbacks After 15 years of research in the waters of the South Atlantic and Indian Oceans, scientists from the Wildlife Conservation Society, the American Museum of Natural History, and an international coalition of organizations have unveiled the largest genetic study of humpback whale populations ever conducted in the Southern Hemisphere.
Establishing standard definitions for genome sequences In 1996, researchers from major genome sequencing centers around the world convened on the island of Bermuda and defined a finished genome as a gapless sequence with a nucleotide error rate of one or less in 10,000 bases. More Genomics Current Events and Genomics News Articles
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Introduction to Genomics
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Our genome is the blueprint to our existence: it encodes all the information we need to develop from a single cell into a hugely complicated functional organism. But it is more than a static information store: our genome is a dynamic, tightly-regulated collection of genes, which switch on and off in many combinations to give the variety of cells from which our bodies are formed. But how do we identify the genes that make up our genome? How do we determine their function? And how do different genes form the regulatory networks that direct the process of life? Introduction to Genomics is a fascinating insight into what can be revealed from the study of genomics: how organisms differ or match; how different organisms evolved; how the genome is constructed and how it operates; and what...
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Introduction to Computational Genomics: A Case Studies Approach
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Where did SARS come from? Have we inherited genes from Neanderthals? How do plants use their internal clock? The genomic revolution in biology enables us to answer such questions. But the revolution would have been impossible without the support of powerful computational and statistical methods that enable us to exploit genomic data. Many universities are introducing courses to train the next generation of bioinformaticians: biologists fluent in mathematics and computer science, and data analysts familiar with biology. This readable and entertaining book, based on successful taught courses, provides a roadmap to navigate entry to this field. It guides the reader through key achievements of bioinformatics, using a hands-on approach. Statistical sequence analysis, sequence alignment, hidden...
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Bioinformatics and Functional Genomics
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The bestselling introduction to bioinformatics and functional genomics—now in an updated edition Widely received in its previous edition, Bioinformatics and Functional Genomics offers the most broad-based introduction to this explosive new discipline. Now in a thoroughly updated and expanded Second Edition, it continues to be the go-to source for students and professionals involved in biomedical research. This edition provides up-to-the-minute coverage of the fields of bioinformatics and genomics. Features new to this edition include: Several fundamentally important proteins, such as globins, histones, insulin, and albumins, are included to better show how to apply bioinformatics tools to basic biological questions. A completely updated companion...
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Essentials of Medical Genomics
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Six new chapters on vital topics of interest such as multilocus SNP genotyping (SNP chips), RNAi, ChIP-chip, and genomic tiling arrays New edition responds to reviewers' and users' desire for greater coverage—now the most useful handbook on the market! Practical, concise summary of everything about genomics and emerging technologies a busy physician or medical student should know Covers concepts and techniques that are in use in medicine now, as well as those on the cutting-edge of science relevant to medicine, from bioinformatics to DNA diagnostics and proteomics NEW: Includes chapter-end exercises, enhancing the utility of the new edition as a textbook NEW: PowerPoint slides of images available at instructor website ...
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Discovering Genomics, Proteomics and Bioinformatics (2nd Edition)
by A. Malcolm Campbell (Author), Laurie J. Heyer (Author)
KEY BENEFIT: Discovering Genomics is the first genomics text that combines web activities and case studies with a problem-solving approach to teach upper-level undergraduates and first-year graduate students the fundamentals of genomic analysis. More of a workbook than a traditional text, Discovering Genomics, Second Edition allows students to work with real genomic data in solving problems and provides the user with an active learning experience. KEY TOPICS: Genomic Medicine Case Study: What’s wrong with my child? Genome Sequence Acquisition and Analysis, Comparative Genomics in Evolution and Medicine, Genome Variations, Genomic Medicine Case Study: Why Can’t I Just Take a Pill to Lose Weight? Basic Research with DNA Microarrays,...
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The Genomics Age: How DNA Technology Is Transforming the Way We Live and Who We Are
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In the history of mankind, few scientific phenomena have so profoundly changed the human experience as will the revolution in the use of DNA technology. Entertaining, informative, and written in plain English, The Genomics Age explores how recent leaps in the understanding of DNA offer astounding scientific promises -- and pose complex ethical issues. The Genomics Age probes the fundamental questions borne of advances in applied DNA science: Can we finally conquer cancer -- once and for all? Will we ever bridge the ideological and political divides in the stem cell debate? Does the rush to develop anti-aging drugs mean we are on the verge of finding the fountain of youth? As we genetically eliminate disease and pick and choose the attributes of our children, will knowing the code...
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Cancer Genomics & Proteomics
by Iiar % Dr John G Delinassios
Cancer Genomics & Proteomics is an international, bimonthly journal devoted to the publication of original high quality articles and reviews on the applications of genomic and proteomic technology to basic, experimental, and clinical cancer research.
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A Primer of Genome Science, 2nd Edition
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A Primer of Genome Science bridges the gap between standard genetics textbooks and highly specialized, technical, and advanced treatments of the subdisciplines. It provides an affordable and up-to-date introduction to the field that is suited to advanced undergraduate or early graduate courses. Bioinformatic principles and experimental strategies are explained side-by-side with the experimental methods, establishing a framework that allows teachers to explore topics and the literature at their own pace.
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Principles of Gene Manipulation and Genomics
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There has been rapid progress in recombinant DNA technology over the last few years, particularly in the area of large-scale biology (genomics and related disciplines). The increasing integration between gene manipulation and genomics is embraced in this book, Principles of Gene Manipulation and Genomics, which brings together for the first time the subjects covered by the best-selling books Principles of Gene Manipulation and Principles of Genome Analysis and Genomics. This important new text has been comprehensively revised, updated, and rewritten to encompass within one volume, basic and advanced gene-manipulation techniques, genome analysis, genomics, transcriptomics, proteomics, and metabolomics, as well as the applications of these fascinating technologies. Principles of Gene...
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2008 Global Conference: Mind If We Get Personal? The Role of Genomics in Your Life
Medicine is getting personal with the advent of genetics-based diagnostics, treatments and prognoses. But some ethicists and clinicians think it is getting too personal too soon. They question whether even the best of the current genetic tests are ready for use on patients, and whether the patients are ready for the information they might learn. But companies are already offering a host of new tests to the public, bypassing the usual medical and ethical intermediaries. To discuss these issues, the 2008 Milken Institute Global Conference brought together a panel of experts, including acclaimed scientist Craig Venter. Genetic information will become integrated into our daily lives, but are we ready?This product is manufactured on demand using DVD-R recordable media. Amazon.com's standard...
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