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ETH Zurich and IBM improve diagnosis of osteoporosis
July 02, 2008Computer simulations help predict fracture risk
With the goal of developing an accurate, powerful and fast method to automate the analysis of bone strength, scientists of the ETH Zurich Departments of Mechanical and Process Engineering and Computer Science teamed up with supercomputing experts at IBM's Zurich Research Laboratory. The breakthrough method developed by the team combines density measurements with a large-scale mechanical analysis of the inner-bone microstructure.
Using large-scale, massively parallel simulations, the researchers were able to obtain a dynamic "heat map" of strain, which changes with the load applied to the bone. This map shows the clinician exactly where and under what load a bone is likely to fracture. "With that knowledge, a clinician can also detect osteoporotic damage more precisely and, by adjusting a surgical plate appropriately, can best determine the location of the damage," explains Dr. Costas Bekas of IBM's Computational Sciences team in Zurich. "This work is an excellent showcase of the dramatic potential that supercomputers can have for our everyday lives."
The joint team utilized the massively large-scale capabilities of the 8-rack Blue Gene /L supercomputer to conduct the first simulations on a 5 by 5 mm specimen of real bone. Within 20 minutes, the supercomputer simulation generated 90 Gigabytes of output data. "It is this combination of increased speed and size that will allow solving clinically relevant cases in acceptable time and unprecedented detail", says Professor Ralph Müller, Director of the ETH Zurich Institute for Biomechanics.
Going beyond static bone strength
Ten years ago, the world's most sophisticated supercomputer, called Deep Blue, would not have been able to handle the sheer size of the calculations. Even with sufficient system memory, it would have taken roughly a week of computing time - too long for meaningful impact on diagnosis and treatment.
"Ten years from now, today's supercomputers' performance will be available in desktop systems, making such simulations of bone strength a routine practice in computer tomography," predicts Dr. Alessandro Curioni, manager of the Computational Sciences group at IBM's Zurich Research Laboratory.
ETH Zurich Professor Peter Arbenz, who initiated the collaboration of the involved groups, explains that what was first needed was state of the art in numerical algorithms in order to solve extremely large problems in surprisingly short time, and that it is the first fundamental step towards clinical use of large scale bone simulations. "We are at the beginning of an exciting journey. This line of research must absolutely be continued in order to achieve our goal," he states. Scientists in future aim to advance simulation techniques to go beyond the calculation of static bone strength to the simulation of the actual formation of the fractures for individual patients, in yet another step towards the fast, reliable and early detection of people at high fracture risk.
ETH Zurich/Swiss Federal Institute of Technology
The joint team utilized the massively large-scale capabilities of the 8-rack Blue Gene /L supercomputer to conduct the first simulations on a 5 by 5 mm specimen of real bone. Within 20 minutes, the supercomputer simulation generated 90 Gigabytes of output data. "It is this combination of increased speed and size that will allow solving clinically relevant cases in acceptable time and unprecedented detail", says Professor Ralph Müller, Director of the ETH Zurich Institute for Biomechanics.
Going beyond static bone strength
Ten years ago, the world's most sophisticated supercomputer, called Deep Blue, would not have been able to handle the sheer size of the calculations. Even with sufficient system memory, it would have taken roughly a week of computing time - too long for meaningful impact on diagnosis and treatment.
"Ten years from now, today's supercomputers' performance will be available in desktop systems, making such simulations of bone strength a routine practice in computer tomography," predicts Dr. Alessandro Curioni, manager of the Computational Sciences group at IBM's Zurich Research Laboratory.
ETH Zurich Professor Peter Arbenz, who initiated the collaboration of the involved groups, explains that what was first needed was state of the art in numerical algorithms in order to solve extremely large problems in surprisingly short time, and that it is the first fundamental step towards clinical use of large scale bone simulations. "We are at the beginning of an exciting journey. This line of research must absolutely be continued in order to achieve our goal," he states. Scientists in future aim to advance simulation techniques to go beyond the calculation of static bone strength to the simulation of the actual formation of the fractures for individual patients, in yet another step towards the fast, reliable and early detection of people at high fracture risk.
ETH Zurich/Swiss Federal Institute of Technology
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Lack of vitamin D causes weight gain and stunts growth in girls
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Overweight children at increased risk of arm and leg injuries following motor vehicle crash
Children who are overweight or obese are over two and a half times more likely to suffer injuries to their upper and lower extremities following a motor vehicle crash compared with normal weight children, according to a new report from the Johns Hopkins Bloomberg School of Public Health's Center for Injury Research and Policy.
Jumping for joy ... and stronger bones
High impact activities such as jumping and skipping that can easily be incorporated into warm-ups before sports and physical education classes, have been shown to benefit bone health in adolescents.
Simple ultrasound exam may predict osteoporosis risk
An ultrasound exam of the heel may be able to predict if a woman is at heightened risk for fractures due to osteoporosis, according to a new multicenter study being published in the July issue of the journal Radiology.
Testosterone Replacement Therapy (TRT) Beneficial In Men 60 And Older
The risk of osteoporosis (bone fracture) in women is highly recognized by the public. Less appreciated is the fact that the disorder also occurs in men. Some two million males have been diagnosed with osteoporosis and another three million are at risk.
Same process discovered to both form skeleton and protect it for life
A protein signaling pathway recently discovered to guide the formation of the skeleton in the fetus also keeps bones strong through adult life, according to two papers published recently in the journal Nature Medicine.
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