Science Current Events | Science News | Brightsurf.com
 
Email a Friend Send to a friend
Printer Friendly Print Man's best friend recruited in the hunt for disease genes

Man's best friend recruited in the hunt for disease genes

October 17, 2008

For centuries man has had a uniquely close relationship with dogs - as a working animal, for security and, perhaps most importantly, for companionship. Now, dogs are taking on a new role - they are helping in the hunt for genetic mutations that lead to diseases in humans.

"Dogs get very similar diseases to humans," said Kerstin Lindblad-Toh of Uppsala University in Sweden and the Broad Institute of MIT and Harvard, Cambridge, Massachusetts. "If you ask a dog owner what sort of conditions their pets get, they will say cancer, allergies, eye diseases."




Lindblad-Toh was speaking at the European Science Foundation's 3rd Functional Genomics Conference, held in Innsbruck, Austria, on 1-4 October. Functional genomics describes the way in which genes and their products, proteins, interact together in complex networks in living cells. If these interactions are abnormal, diseases can result. The Innsbruck meeting brought together more than 450 scientists from across Europe to discuss recent advances in the role of functional genomics in disease.

Many canine diseases could share the same genetic basis in humans and dogs, Lindblad-Toh told the conference, and because dogs have been bred into clear isolated populations - the different breeds - it is often easier to detect a genetic flaw that leads to a disease than it is in humans. Once the rogue gene has been found in the dog, it could make it easier look for mutations in the same gene in man.

"For example we have found genetic mutation that results in a condition called day blindness that can affect dachshunds," Lindblad-Toh said. A similar condition can arise in humans, and analysis of the mutated protein in the dog is providing new information about the disease in man. The team is also looking at genes associated with cancer of the blood vessels to which golden retrievers are prone.

A new European consortium has been set up called LUPA, where twenty veterinary schools from 12 countries spread across Europe will work together to collect 10,000 DNA samples from purebred dogs, comparing healthy animals with those affected by similar diseases as human. The analysis of the genome of affected dogs compared to healthy ones of the same breed will lead to the identification of genes implied in the mechanisms of these diseases. The four-year project aims initially to pinpoint genetic markers for dog diseases and help to reduce the high level of inherited disease in purebred dogs. The identification of these genes implied in disease development will help to understand the mechanisms and pathways of the pathology.

For example in Sweden, more than one-third of English Springer Spaniels are diagnosed with mammary tumours, analogous to breast cancers in humans. An increased risk for malignant mammary tumours has been reported also in other breeds, including Cocker Spaniels, German Shepherds and Boxers, suggesting that these breeds may carry genetic risk factors for this type of cancer. If the genes implicated in the disease can be singled out this could provide a new opportunity to improve prevention, diagnosis and treatment of human breast cancer.

"We want to find a lot of risk factors and bring them back to human patients over the next few years," Lindblad-Toh said.

European Science Foundation



Related Functional Genomics Current Events and Functional Genomics News Articles Functional Genomics Current Events and Functional Genomics News RSS Functional Genomics Current Events and Functional Genomics News RSS
Protein changes in heart strengthen link between Alzheimer's disease and chronic heart failure
A team of U.S., Canadian and Italian scientists led by researchers at Johns Hopkins report evidence from studies in animals and humans supporting a link between Alzheimer's disease and chronic heart failure, two of the 10 leading causes of death in the United States.

Pathogen protection and virulence: Dark side of fungal membrane protein revealed
Researchers at the Virginia Bioinformatics Institute (VBI) at Virginia Tech and Montana State University have discovered a fungal protein that plays a key role in causing disease in plants and animals and which also shields the pathogen from oxidative stress.

Exon-skipping drug prevents muscle wasting, maintains muscle function in dystrophin deficient mice
An exon skipping PPMO has demonstrated dramatic effects in the prevention and treatment of severely affected, dystrophin and utrophin-deficient mice, preventing severe deterioration of the treated animals and extending their lifespan.

Species diversity helps ASU researchers refine analyses of human gene mutations
In the new era of personalized medicine, physicians hope to provide earlier diagnoses and improve therapy by evaluating patients' genetic blueprints. But, as a new bioinformatics study emphasizes, the first step must be to correctly decipher the deluge of information locked in our DNA and determine its impact on human health.

New information about how fat increases blood pressure could help identify those at risk
Some of the first information about how fat causes hypertension have been identified by researchers who say the findings should one day help identify which obese people - and maybe some thin ones too - are at risk for hypertension and which drugs would work best for them.

Toxic chemicals affect steroid hormones differently in humans and invertebrates
In a study with important consequences for studies on the effects of chemicals on steroid responses in humans, a team of French and American scientists, including Michael E. Baker, PhD, professor in UC San Diego's Department of Medicine, Division of Nephrology-Hypertension, have found that - contrary to earlier assumptions - enzymes used for the synthesis of steroids in insects, snails, octopuses and corals are unrelated to those used in humans.

How oxidative stress may help prolong life
Oxidative stress has been linked to aging, cancer and other diseases in humans. Paradoxically, researchers have suggested that small exposure to oxidative conditions may actually offer protection from acute doses.

Learning how the pieces responsible for interpreting the human genome work
The human genome complete sequencing project in 2003 revealed the enormous instruction manual necessary to define a human being. However, there are still many unanswered questions. There are few indications on where the functional elements are found in this manual.

200,000 rice mutants available worldwide for scientific investigation
Scientists across the world are building an extensive repository of genetically modified rice plants in the hope of understanding the function of the approximately 57,000 genes that make up the genome of Oryza sativa.

Good bacteria can be EZ Pass for oral vaccine against anthrax
Researchers at North Carolina State University have discovered that the good bacteria found in dairy products and linked to positive health benefits in the human body might also be an effective vehicle for an oral vaccine that can provide immunity to anthrax exposure.
More Functional Genomics Current Events and Functional Genomics News Articles
Bioinformatics and Functional Genomics

Bioinformatics and Functional Genomics
by Jonathan Pevsner (Author)

The bestselling introduction to bioinformatics and functional genomics—now in an updated edition

Widely received in its previous edition, Bioinformatics and Functional Genomics offers the most broad-based introduction to this explosive new discipline. Now in a thoroughly updated and expanded Second Edition, it continues to be the go-to source for students and professionals involved in biomedical research.

This edition provides up-to-the-minute coverage of the fields of bioinformatics and genomics. Features new to this edition include:

Several fundamentally important proteins, such as globins, histones, insulin, and albumins, are included to better show how to apply bioinformatics tools to basic biological questions. A completely updated companion...

Functional Genomics: A Practical Approach (Practical Approach Series)

Functional Genomics: A Practical Approach (Practical Approach Series)
by Stephen P. Hunt (Editor), Rick Livesey (Editor)

Univ. College, London, UK. Comprehensive laboratory manual and guide to the key methods available for gene and protein expression profiling in a variety of systems. Includes specific large-scale approaches, such as cDNA microarrays, serial analysis of gene expression (SAGE) and proteomics. For researchers. Softcover, hardcover also available.

Functional Genomics (Methods in Molecular Biology)

Functional Genomics (Methods in Molecular Biology)
by Michael J. Brownstein (Editor), Arkady Khodursky (Editor)

National Institutes of Health, Rockville, MD. Text describes step-by-step methods for microarray-based studies and provides guidance in optimal data analysis and informatics. Reviews each key method and analytical techniques used in functional genomics. For researchers.

Yeast Functional Genomics and Proteomics: Methods and Protocols (Methods in Molecular Biology)

Yeast Functional Genomics and Proteomics: Methods and Protocols (Methods in Molecular Biology)
by Igor Stagljar (Editor)

Given the popularity and utility of Saccharomyces cerevisiae, yeast-based functional genomics and proteomics technologies, developed over the past decade, have contributed greatly to our understanding of bacterial, yeast, fly, worm and human gene functions. In Yeast Functional Genomics and Proteomics: Methods and Protocols, experts in the field contribute stand-alone protocols suitable for daily use in research laboratories. The volume examines methods from the most major and fundamental techniques to more cutting-edge, advanced concepts. As part of the highly successful Methods in Molecular Biology™ series, the chapters are clearly formatted with introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory...

Clinical Nutrition: A Functional Approach

Clinical Nutrition: A Functional Approach
by Jeffrey S. Bland (Author), Buck Levin (Author), Linda Costarella (Author), DeAnn Liska (Author), Dan Lukaczer (Author), Barbara Schiltz (Author), Michael Schmidt (Author), Robert Lerman (Author), David Jones (Author)

Most contemporary health practitioners have little formal education in clinical nutrition beyond recognizing deficiency diseases. Even when a great deal of nutritional information is absorbed, many clinicians still do not know how to apply it effectively for the individual patient. This book helps to close that knowledge gap by advancing your understanding beyond the traditional emphasis on isolated nutritional deficiencies and RDA guidelines and by focusing on underlying metabolic patterns and nutrient interactions. Combined with a functional medicine focus on the unique biochemistry, genetics, and environment of the individual patient, the innovative approach of this text helps clinicians make the vital connection between nutritional theory and practice.

Proteome Research: New Frontiers in Functional Genomics (Principles and Practice)

Proteome Research: New Frontiers in Functional Genomics (Principles and Practice)
by Marc R. Wilkins (Editor), Keith L. Williams (Editor), Ron D. Appel (Editor), Denis F. Hochstrasser (Editor)

Recent advances in two-dimensional electrophoresis, protein microanalysis and bioinformatics have made the large-scale, systematic analysis of proteins and their post-translational modifications from any tissue or organism possible. This approach has acquired the name "Proteome Research", and can be considered as the core of functional genomics. The results of proteome analysis show which genes are expressed, how the protein products are modified, and how they interact, making proteome research of fundamental importance for the biologist, clinician, and pharmaceutical industry.

Computational Text Analysis: For Functional Genomics and Bioinformatics

Computational Text Analysis: For Functional Genomics and Bioinformatics
by Soumya Raychaudhuri (Author)

This book brings together the two disparate worlds of computational text analysis and biology and presents some of the latest methods and applications to proteomics, sequence analysis and gene expression data. Modern genomics generates large and comprehensive data sets but their interpretation requires an understanding of a vast number of genes, their complex functions, and interactions. Keeping up with the literature on a single gene is a challenge itself-for thousands of genes it is simply impossible.
Here, Soumya Raychaudhuri presents the techniques and algorithms needed to access and utilize the vast scientific text, i.e. methods that automatically "read" the literature on all the genes. Including background chapters on the necessary biology, statistics and genomics, in...

The Handbook of Plant Functional Genomics: Concepts and Protocols (Molecular Plant Biology Handbook)

The Handbook of Plant Functional Genomics: Concepts and Protocols (Molecular Plant Biology Handbook)
by Guenter Kahl (Editor), Khalid Meksem (Editor)

In this incisive, concise overview of this booming field, the editors—two of the leading figures in the field with a proven track record—combine their expertise to provide an invaluable reference on the topic.

Following a treatment of transcriptome analysis, the book goes on to discuss replacement and mutation analysis, gene silencing and computational analysis. The whole is rounded off with a look at emerging technologies.

Each chapter is accompanied by a concise overview, helping readers to quickly identify topics of interest, while important, carefully selected words and concepts are explained in a handy glossary.

Equally accessible to both experienced scientists and newcomers to the field.

Functional Plant Genomics

Functional Plant Genomics
by J. F. Morot-jGaudry (Editor), P. Lea (Editor), J. F. Briat (Editor)

The openings offered by functional genomics reconciles organism biology and molecular biology, in order to define an integrative biology that should allow new insights about how a phenotype is built up from a genotype in interaction with its environment. This book covers a wide area of concepts and methods in genomics. These range from international genome sequencing projects, to invaluable bioinformatics tools, and analytical methods of gene expression, including final metabolic products and their specific tissue and cellular compartmentalization. This new knowledge enables readers to understand the integration of basic physiological functions, and developmental programs. Also, the establishment of tight relationships between genomics, and genetics and plant breeding reveals synergies...

Plant Functional Genomics

Plant Functional Genomics
by Dario Leister (Editor)

Discover cutting-edge knowledge for engineering a more productive and environment-friendly agriculture!

In Plant Functional Genomics, you’ll find a cross-section of state-of-the-art research on the biological function of plant genes and how they work together in health and disease. World-leading scientists in the field present breakthrough techniques, discuss the results of projects aimed at dissecting particular plant functions, and provide an overview on the state of functional genomics for several plant and plant-related species. With figures, tables, and illustrations, this book will help scientists, researchers, and advanced students in botany find new ways of creating novel plant forms to better serve the needs of a rapidly expanding human population.

Plant...

© 2009 BrightSurf.com