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Earth's highest known microbial systems fueled by volcanic gases
March 04, 2009
Gases rising from deep within the Earth are fueling the world's highest-known microbial ecosystems, which have been detected near the rim of the 19,850-foot-high Socompa volcano in the Andes by a University of Colorado at Boulder research team. The new study shows the emission of water, carbon dioxide and methane from small volcanic vents near the summit of Socompa sustains complex microbial ecosystems new to science in the barren, sky-high landscape, said CU-Boulder Professor Steve Schmidt. He likened the physical environment of the Socompa volcano summit -- including the thin atmosphere, intense ultraviolet radiation and harsh climate -- to the physical characteristics of Mars, where the hunt for microbial life is under way by NASA. The microbial communities atop Socompa -- which straddles Argentina and Chile high in the Atacama Desert -- are in a more extreme environment and not as well understood as microbes living in hydrothermal vents in deep oceans, he said. The Socompa microbial communities are located adjacent to several patches of green, carpet-like plant communities -- primarily mosses and liverworts -- discovered in the 1980s by Stephan Halloy of Conservation International in La Paz, Bolivia, a co-author on the new CU-Boulder study. "These sites are unique little oases in the vast, barren landscape of the Atacama Desert and are supported by gases from deep within the Earth," said Schmidt, a professor in the ecology and evolutionary biology department. "Scientists just haven't been looking for microorganisms at these elevations, and when we did we discovered some strange types found nowhere else on Earth." A paper on the subject by Schmidt and his colleagues was published in the February 2009 issue of the journal Applied and Environmental Microbiology. Co-authors on the study included CU-Boulder's Elizabeth Costello and Sasha Reed, Preston Sowell of Boulder's Stratus Consulting Inc., and Halloy. The team used a sophisticated technique that involves extracting DNA from the soil to pinpoint new groups of microbes, using polymerase chain reaction, or PCR, to amplify and identify them, providing a snapshot of the microbial diversity on Socompa. The new paper is based on an ongoing analysis of soil samples collected during an expedition to Socompa several years ago. The research team also reported a new variety of microscopic mite in the bacterial colonies near Socompa's rim, which appears to be the highest elevation that mites have ever been recorded on Earth, Schmidt said. Costello, a research associate in CU-Boulder's chemistry and biochemistry department, said small amounts of sunlight, water, methane and CO2 work in concert in the barren soils to fuel microbial life near the small volcanic vents, or fumaroles. Such conditions "relieve the stress" on the high-elevation, arid soils enough to allow extreme life to get a toehold, Costello said. "It's as if these bacterial communities are living in tiny, volcanic greenhouses." The CU-Boulder team also discovered unique colonies of bacteria living on the slopes of Socompa in extremely dry soils not associated with fumaroles. The bacteria detected in such dry soils may be transient life transported and deposited by wind in the extreme environment of Socompa, with some organisms surviving to bloom during periodic pulses of water and nutrients, said Schmidt. "These sites are significantly less diverse," said Costello. "But the thing that really stands out is just how tough these microbes are and how little it takes for them to become established." Schmidt, who likened the high Andes to the harsh Dry Valleys of Antarctica under study by researchers from NASA's Astrobiology Institute because of their hostile, arid conditions, said the new research also provides information on how the cold regions of Earth function and how they may respond to future climate change. Research in such extreme environments could lead to the discovery of new antibiotics and other products. A return expedition to Socompa in February 2009 by Schmidt included a Chilean scientist, an Argentinean microbiologist, a Boulder spectral-imaging expert and an Argentinean archaeologist. There is archaeological evidence that ancient Incans once roamed over Socompa, and the remains of three, 500-year-old mummified Inca children were discovered in 1999 atop the nearby Llullaillaco volcano, apparent sacrifice victims. Although reaching the summit of Socompa requires two days in a four-wheel drive vehicle and two more days of hiking, recent footpaths near the summit apparently made by adventurers may have damaged some of the mat-like plant communities, Costello said. University of Colorado at Boulder

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Microbial Ecosystems of Antarctica (Studies in Polar Research)
by Warwick F. Vincent (Author)
This book provides a structured account of the full range of environments in Antarctica and of the microbial communities that live within them. Environments examined include: snow and ice; benthic marine; sea ice; lakes and streams; marginal ice; soil; the open ocean; rock. In the more extreme habitats of this region microscopic life forms constitute the entire biology of the habitat, but in all antarctic environments the microbial communities play a major and often dominant role in the transfer of carbon, nutrients and energy throughout the ecosystem. The book examines the major features of the chemical and physical environment in each habitat, and the influence of these features on the population structure and dynamics of their microbiota.
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The Oil industry and microbial ecosystems: Proceedings of a meeting organized by the Institute of Petroleum and held at the University of Warwick, England, September, 1977
by K.W.A. and H.J. Somerville. (Editor). Chater (Author)
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The Rumen Ecosystem: The Microbial Metabolism and Its Regulation
by Sadao Hoshino (Editor), Ryoji Onodera (Editor), Hajime Minato (Editor), Hisao Itabashi (Editor)
These proceedings review the state of knowledge of the rumen ecosystem and its regulation, presented by 52 authorities from 10 countries. Topics include: an analysis of the rumen ecosystem, evolutionary aspects of the inhabitating protozoa, metabolism of nitrogenous compounds and symbiotic interrelations, digestion of plant cell walls, nutritional roles of rumen protozoa, regulation of rumen ecosystem, and gene manipulation of rumen bacteria.
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The Rumen ecosystem: The microbial metabolism and its regulation : proceedings of a satelite symposium of the 7th International Symposium on Ruminant Physiology, Hakone, Japan, 1989
by Springer-Verlag (Publisher)
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Winter losses of nitrogen and phosphorus from Italian ryegrass, meadow fescue and white clover in a northern temperate climate [An article from: Agriculture, Ecosystems and Environment]
by I. Sturite (Author), T.M. Henriksen (Author), T.A. Breland (Author)
This digital document is a journal article from Agriculture, Ecosystems and Environment, published by Elsevier in 2007. The article is delivered in HTML format and is available in your Amazon.com Media Library immediately after purchase. You can view it with any web browser.
Description: We have studied to what degree Italian ryegrass (Lolium multiflorum Lam.), white clover (Trifolium repens L.) and meadow fescue (Festuca pratensis L.) are able to preserve nitrogen (N) and phosphorous (P) in shoots and roots from one growing season to the next in a northern temperate climate. Field experiments were performed during four consecutive winters in central southeast Norway (60^o42'N, 10^o51'E), and N and P in plant biomass were measured in the autumn and in the spring. We also...
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Rapid effects of plant species diversity and identity on soil microbial communities in experimental grassland ecosystems [An article from: Soil Biology and Biochemistry]
by G. Loranger-Merciris (Author), L. Barthes (Author), A. Gastine (Author), Lead (Author)
This digital document is a journal article from Soil Biology and Biochemistry, published by Elsevier in 2006. The article is delivered in HTML format and is available in your Amazon.com Media Library immediately after purchase. You can view it with any web browser.
Description: Changes in plant community structure, including the loss of plant diversity may affect soil microbial communities. To test this hypothesis, plant diversity and composition were experimentally varied in grassland plots cultivated with monocultures or mixtures of 2, 3 or 4 species. We tested the effects of monocultures versus mixtures and of plant species composition on culturable soil bacterial activity, number of substrates used and catabolic diversity, microbial biomass N, microbial respiration, and...
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Changes in soil microbial and nematode communities during ecosystem decline across a long-term chronosequence [An article from: Soil Biology and Biochemistry]
by W.M. Williamson (Author), D.A. Wardle (Author), G.W. Yeates (Author)
This digital document is a journal article from Soil Biology and Biochemistry, published by Elsevier in . The article is delivered in HTML format and is available in your Amazon.com Media Library immediately after purchase. You can view it with any web browser.
Description: Following the creation of new land surfaces, there is an initial build-up phase, but in the prolonged absence of catastrophic disturbance an ecosystem decline phase has often been observed. While a number of studies have investigated the changes in soil biota that occur during the build-up phase, few studies have investigated how the soil food web changes during the ecosystem decline phase, even though such studies may assist our understanding of biotic factors that contribute to long-term ecosystem changes....
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Microbial community PLFA and PHB responses to ecosystem restoration in tallgrass prairie soils [An article from: Soil Biology and Biochemistry]
by V.L. McKinley (Author), A.D. Peacock (Author), D.C. White (Author)
This digital document is a journal article from Soil Biology and Biochemistry, published by Elsevier in . The article is delivered in HTML format and is available in your Amazon.com Media Library immediately after purchase. You can view it with any web browser.
Description: Native North American prairie grasslands are renowned for the richness of their soils, having excellent soil structure and very high organic content and microbial biomass. In this study, surface soils from three prairie restorations of varying ages and plant community compositions were compared with a nearby undisturbed native prairie remnant and a cropped agricultural field in terms of soil physical, chemical and microbial properties. Soil moisture, organic matter, total carbon, total nitrogen, total...
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Microbial Diversity and Ecosystem Function
by Dennis Allsopp (Author), R R Colwell (Author)
Microorganisms are key components in the functioning of ecosystems and the importance of their role is being increasingly recognized. In this volume, more than 30 contributors, invited from around the world, cover a wide range of topics: the extent of microbial diversity, the impact of microorganisms on global ecology and nutrient cycling, microorganisms and ecosystem maintenance, extremophiles, inventorying and monitoring microorganisms and the microbiology resource base.
The book is based on papers presented at an IUBS/IUMS/SCOPE/UNEP-sponsored workshop on Microorganisms and the Maintenance of Biodiversity held in the UK in August 1993. It provides an up-to-date review of concepts and concerns in this increasingly important area of biodiversity studies, and will interest a...
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