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First-of-its-kind integrated dataset enables genes-to-ecosystems research

A new dataset has been released that combines molecular information about the poplar tree microbiome with ecosystem-level processes. The dataset provides detailed information on 27 genetically distinct variants of Populus trichocarpa, a bioenergy crop, and includes data on gene expression, soil chemistry, and microbial diversity.

SourceDOE/Oak Ridge National Laboratory·JournalScientific Data·TypeObservational study·DateApr 8, 2024

An inside look at how plants and mycorrhizal fungi cooperate

Researchers studied the gene expression of plants and mycorrhizal fungi using RNA sequencing and spatial transcriptomics, identifying over 1,000 upregulated genes that could be tuned to optimize this symbiosis. This work offers benefits for addressing climate change by improving soil carbon storage and biofuel feedstocks.

SourceDOE/Lawrence Berkeley National Laboratory·JournalNature Plants·TypeExperimental study·DateApr 8, 2024
Apple iPhone 17 Pro

Apple iPhone 17 Pro delivers top performance and advanced cameras for field documentation, data collection, and secure research communications.

Maize genes control little helpers in the soil

Researchers discovered that maize genetic makeup affects which microorganisms cluster around roots, boosting root growth. The study found that specific bacteria, like Massilia, promote lateral root growth when nitrogen is scarce, suggesting a potential breeding strategy for drought-tolerant maize varieties.

SourceUniversity of Bonn·JournalNature Plants·TypeExperimental study·DateMar 21, 2024

Targeting seed microbes to improve seed resilience

Researchers at KAUST have investigated the potential of manipulating fonio's association with soil microbes to improve its drought tolerance and nutritional content. The study found that the core microbiome of fonio millet plays an important role in its general metabolism, and that environmental factors can influence microbial diversit...

SourceKing Abdullah University of Science & Technology (KAUST)·JournalMicrobiome·DateFeb 29, 2024

Researchers uncover a key link in legume plant-bacteria symbiosis

Legume plants have a unique ability to interact with nitrogen-fixing bacteria, allowing them to thrive without external nitrogen. Researchers identified four essential phosphorylation sites on the SYMRK kinase that mediate this symbiotic relationship.

SourceAarhus University·JournalProceedings of the National Academy of Sciences·TypeExperimental study·DateFeb 12, 2024
SAMSUNG T9 Portable SSD 2TB

SAMSUNG T9 Portable SSD 2TB transfers large imagery and model outputs quickly between field laptops, lab workstations, and secure archives.

Fungal-rich soil may improve green roofs

A Dartmouth-led research team created an experimental green roof to test the effect of native prairie microbes on soil microbial community development. Their findings demonstrate that active management accelerates soil development faster than passive reestablishment, fostering a more diverse and sustainable soil community.

SourceDartmouth College·JournalNew Phytologist·TypeExperimental study·DateJan 31, 2024

Talking tomatoes: How their communication is influenced by enemies and friends

Research finds that plants decrease volatile organic compounds in response to fungal associations, but not when exposed to caterpillars. Plants with fungal associations also exhibit increased growth and complex root structures.

SourceCarl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign·JournalJournal of Chemical Ecology·TypeExperimental study·DateJan 24, 2024
Creality K1 Max 3D Printer

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NUS-SCELSE scientists uncover plant hormone that recruits good bacteria to boost plant growth by 30%

Researchers at NUS-SCELSE have discovered a plant hormone, methyl jasmonate, that communicates with beneficial microorganisms in the soil, boosting crop growth by 30%. This finding holds great promise for sustainable agriculture and could lead to the development of nature-based agrochemicals.

SourceNational University of Singapore·JournalNature Chemical Biology·TypeExperimental study·DateDec 6, 2023

Inoculation against diseased fields

Researchers found that mycorrhizal fungi can significantly improve crop yields by up to 40% in fields with high levels of fungal pathogens. The inoculation was most effective when the soil had already been contaminated with pathogens, serving as a protective shield against further damage.

SourceUniversity of Zurich·JournalNature Microbiology·TypeExperimental study·DateNov 30, 2023
Garmin GPSMAP 67i with inReach

Garmin GPSMAP 67i with inReach provides rugged GNSS navigation, satellite messaging, and SOS for backcountry geology and climate field teams.

Discovering the secrets of plant defense

A team of MSU scientists has identified a key protein in transporting antimicrobial proteins out of plant cells, which could lead to breakthroughs in crop productivity and yield. By understanding how plants defend themselves against pathogens, researchers can develop new strategies to improve crop resilience.

SourceMichigan State University·JournalNature Communications·TypeExperimental study·DateNov 19, 2023

Journal honors pioneering scientist with new series

The American Phytopathological Society has created a new series of distinguished reviews in honor of Harold H. Flor, who developed the gene-for-gene concept in plant pathology. The series presents authoritative reviews on molecular plant-microbe interactions, providing a historical perspective and future directions for research.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·DateOct 11, 2023
Apple AirPods Pro (2nd Generation, USB-C)

Apple AirPods Pro (2nd Generation, USB-C) provide clear calls and strong noise reduction for interviews, conferences, and noisy field environments.

Genetically engineering associations between plants and nitrogen-fixing microbes could lessen dependence on synthetic fertilizer

Engineering associations between plants and nitrogen-fixing microbes using genetic engineering could lessen dependence on synthetic fertilizer. This approach involves bi-directional signaling to release fixed nitrogen, promoting efficient communication between engineered plants and microbes.

SourceCell Press·JournalTrends in Microbiology·TypeLiterature review·DateSep 26, 2023

Some hosts have an “evolutionary addiction” to their microbiome

Tobin Hammer argues that some hosts have evolved a dependence on their microbiome, but the microbes do not provide any benefits in return. This phenomenon, known as evolutionary addiction, could have unique implications for understanding host-microbe interactions.

SourceCell Press·JournalTrends in Microbiology·TypeCommentary/editorial·DateAug 29, 2023

First defence against devastating ToCSV tomato virus explored

A team of researchers at the University of Johannesburg has made a groundbreaking discovery about how tomato plants defend themselves against the devastating ToCSV virus. By studying the molecular genetics of infected tomato varieties, they found that viral DNA methylation plays a crucial role in resistance to ToCSV.

SourceUniversity of Johannesburg·JournalFrontiers in Plant Science·TypeExperimental study·DateAug 28, 2023
CalDigit TS4 Thunderbolt 4 Dock

CalDigit TS4 Thunderbolt 4 Dock simplifies serious desks with 18 ports for high-speed storage, monitors, and instruments across Mac and PC setups.

Immune defense as key for plants conquering land

A new study suggests that one branch of plant immunity evolved early during terrestrial evolution, enabling plants to establish themselves on dry land. The research found that pattern-triggered immunity (PTI) is conserved in non-vascular plants, such as liverwort Marchantia polymorpha.

SourceMax Planck Institute for Plant Breeding Research·JournalCurrent Biology·TypeExperimental study·DateAug 23, 2023

Soil microbes help plants cope with drought, but not how scientists thought

Researchers found that soil microbes adapt to drought conditions over time and provide benefits to plants when grown together, even without plant signals. This challenges the long-held assumption of co-evolutionary dialogue between plants and microbes.

SourceUniversity of Illinois College of Agricultural, Consumer and Environmental Sciences·JournalProceedings of the Royal Society B Biological Sciences·DateJul 25, 2023

Study improves understanding of how bacteria benefit plant growth

Researchers found that competition between beneficial bacterial strains degrades the service they provide to plants, resulting in smaller benefits. The study used native California plant and eight compatible nitrogen-fixing bacterial strains to directly measure their ability to infect plants and provide benefits.

SourceUniversity of California - Riverside·JournalCurrent Biology·TypeExperimental study·DateJul 24, 2023
AmScope B120C-5M Compound Microscope

AmScope B120C-5M Compound Microscope supports teaching labs and QA checks with LED illumination, mechanical stage, and included 5MP camera.

New toxin facilitates disease infection and spread in wheat

Researchers have identified a new trichothecene, NX, produced by Fusarium graminearum, which contributes to the pathogen's ability to infect wheat and spread disease. Deleting the gene responsible for NX production reduces toxin levels and disease severity, providing potential control methods.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·DateJul 13, 2023

Building models to predict interactions in plant microbiomes

Plant microbiomes have the potential to make agriculture more sustainable, but understanding their complex interactions is crucial. Researchers have developed models that use metabolic capabilities of bacteria to predict how these microbial communities compete or cooperate.

SourceETH Zurich·JournalScience·TypeComputational simulation/modeling·DateJul 6, 2023

Seeing the insides of plants in 3D

A new technology called PHYTOMap allows researchers to study dozens of genes simultaneously without genetic manipulation, providing insights into plant responses to climate change. The method has the potential to improve crop resiliency and inform agriculture optimization.

SourceSalk Institute·JournalNature Plants·TypeImaging analysis·DateJun 12, 2023
Sony Alpha a7 IV (Body Only)

Sony Alpha a7 IV (Body Only) delivers reliable low-light performance and rugged build for astrophotography, lab documentation, and field expeditions.

CABBI researchers chart oilcane microbiome

A new study by CABBI researchers has identified the types of microbes associated with engineered oilcane, revealing diverse microbial associations that could increase oil yields for sustainable bioenergy production. The findings suggest that plant-microbial interactions play a key role in determining the composition of the microbiome.

SourceUniversity of Illinois at Urbana-Champaign Institute for Sustainability, Energy, and Environment·JournalBiotechnology for Biofuels and Bioproducts·TypeExperimental study·DateMay 10, 2023

Keeping competitors away drives colonization success in the plant microbiota

A study reveals that a bacterium produces two molecules to keep microbial competitors at bay, giving it an advantage in colonizing and dominating the root niche. This finding has implications for developing biologicals in agriculture and understanding the inner workings of the plant microbiota.

SourceMax Planck Institute for Plant Breeding Research·JournalProceedings of the National Academy of Sciences·DateApr 3, 2023

CABBI/GLBRC team explores leaf microbiome in perennial bioenergy crops

A study published in Nature Communications reveals that microbes living on the leaves of perennial crops like miscanthus and switchgrass play a crucial role in plant resilience. The research identifies specific microbial functions that could be targeted for future management, promoting crop growth and reducing environmental impact.

SourceUniversity of Illinois at Urbana-Champaign Institute for Sustainability, Energy, and Environment·JournalNature Communications·TypeData/statistical analysis·DateMar 21, 2023

An innovative approach reveals a novel strategy for engineering root nodule symbiosis into important crops for more sustainable agri-food systems

Researchers developed a novel strategy to engineer root nodule symbiosis in legumes and cereals using nanobodies. This approach, tested in barley and Lotus plants, initiates nodulation by bringing receptors together, revealing the core complex involved in symbiotic signaling.

SourceAarhus University·JournalScience·TypeExperimental study·DateJan 19, 2023
Sky & Telescope Pocket Sky Atlas, 2nd Edition

Sky & Telescope Pocket Sky Atlas, 2nd Edition is a durable star atlas for planning sessions, identifying targets, and teaching celestial navigation.

A legume locus stimulates promiscuous interaction with soil bacteria

A recent study discovered a legume locus that stimulates promiscuous interaction with soil bacteria, forming nitrogen-fixing nodules with up to 30 different rhizobial strains. This finding opens the door for crop improvement by naturally promoting plant growth through symbiotic associations.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·DateJan 5, 2023

Newly identified protease inhibitors may aid uninhibited potato cultivation

Wild potato varieties have evolved multiple resistance factors to combat pathogens like Pectobacterium species. Researchers have identified protease inhibitors that prevent bacterial malignance by interrupting their communication system and degrading plant cell walls.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·DateDec 15, 2022

Scientists return from expedition after mapping fungal networks on world’s most remote island

Researchers from SPUN mapped the diversity of mycorrhizal fungi across Palmyra Atoll, finding unique nutrient feedback loops that support rainforests, plankton communities, and coral reefs. The study highlights the importance of these underground networks in maintaining ecosystem resilience to climate change.

SourceSPUN (Society for the Protection of Underground Networks)·TypeObservational study·DateDec 12, 2022
Rigol DP832 Triple-Output Bench Power Supply

Rigol DP832 Triple-Output Bench Power Supply powers sensors, microcontrollers, and test circuits with programmable rails and stable outputs.

The missing link: Fatty acid metabolism impacts plant immunity

A recent study by Zhenzhen Zhao and colleagues found that Arabidopsis plants lacking Acyl Carrier Protein 1 (ACP1) are more resistant to bacterial pathogen Pseudomonas syringae. ACP1 is essential for maintaining hormone homeostasis, which affects plant stress responses.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·DateOct 13, 2022

Plant immune systems can adapt to non-living environmental stressors, a new study reveals

A recent study led by Eliza Loo found that plant immune receptors and signaling components confer salt tolerance even in plants challenged by non-pathogenic microbes. This suggests that plants can sense and initiate adaptive responses to abiotic stresses upon detecting alterations in cues presented by plant-inhabiting microbes.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·DateAug 24, 2022
Anker Laptop Power Bank 25,000mAh (Triple 100W USB-C)

Anker Laptop Power Bank 25,000mAh (Triple 100W USB-C) keeps Macs, tablets, and meters powered during extended observing runs and remote surveys.

Understanding cooperation and conflict in plant symbionts

Researchers examine the genomic variations of 191 microbial strains paired with their host plants to understand cooperation and conflict. They found that 80% of symbiont genes align with the host's interest, often paying for them to be beneficial despite competing interests.

SourceCarl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign·JournalProceedings of the Royal Society B Biological Sciences·TypeExperimental study·DateAug 3, 2022

From genes to plant microbiota

A study found that plant genetic variability controls specific microorganisms, influencing microbial community composition and plant reproductive success. The research used Arabidopsis thaliana genotypes and metabarcoding DNA sequencing to analyze the impact of genetics on leaf microbiota.

SourceINRAE - National Research Institute for Agriculture, Food and Environment·JournalProceedings of the National Academy of Sciences·DateJul 26, 2022
GQ GMC-500Plus Geiger Counter

GQ GMC-500Plus Geiger Counter logs beta, gamma, and X-ray levels for environmental monitoring, training labs, and safety demonstrations.

Fungus found to synthesize valuable compounds in perennial plant found in Northern Asia

A study discovered that fungus Cyanodermella asteris synthesizes valuable compounds in plant Aster tataricus, influencing its growth. The interaction reveals a two-way dialogue between the microbe and host, with the fungus producing beneficial compounds while also being influenced by plant hormones.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·TypeExperimental study·DateFeb 17, 2022
Apple MacBook Pro 14-inch (M4 Pro)

Apple MacBook Pro 14-inch (M4 Pro) powers local ML workloads, large datasets, and multi-display analysis for field and lab teams.

Microbe sneaks past tomato defense system, advances evolutionary battle

A new study reveals that Xanthomonas euvesicatoria has evolved to evade the immune system of tomato plants by changing a single amino acid in its flagellin proteins. This finding poses significant challenges for breeding disease-resistant tomato varieties, forcing farmers to rely on fungicides and copper treatments.

SourceUniversity of Illinois College of Agricultural, Consumer and Environmental Sciences·JournalMolecular Plant-Microbe Interactions·DateDec 20, 2021

Science snapshots from Berkeley Lab

Researchers have created a new approach to edit genes within specific bacteria in a community using CRISPR-Cas9, enabling targeted genetic modifications. This technology could be used to track edited microbes and potentially treat diseases like digestive issues or create more resilient crops.

SourceDOE/Lawrence Berkeley National Laboratory·JournalNature Microbiology·TypeExperimental study·DateDec 17, 2021

Inventory of the world belowground: Using DNA to study fungal communities

A new study published in Applications in Plant Sciences highlights the negative effects of clearcutting on mycorrhizal fungi, showing less diversity in formerly deforested areas. High-throughput sequencing reveals over 300 distinct fungal lineages in soil and root samples, shedding light on ecosystem health.

SourceBotanical Society of America·JournalApplications in Plant Sciences·DateDec 8, 2021

Danforth Center scientists develop an unprecedented three-dimensional X-ray microscope methodology to image plants at cellular resolution

Plant scientists can now image above and below-ground structures with unprecedented clarity, revealing new insights into biological processes. The development of three-dimensional X-ray microscopy enables the observation of microscopic molecular and cellular processes driving plant phenotypes.

SourceDonald Danforth Plant Science Center·JournalPLANT PHYSIOLOGY·DateDec 7, 2021
GoPro HERO13 Black

GoPro HERO13 Black records stabilized 5.3K video for instrument deployments, field notes, and outreach, even in harsh weather and underwater conditions.

CRISPRing the microbiome is just around the corner

Researchers at UC Berkeley have developed a new CRISPR editing technology that enables simultaneous editing of genes in multiple cell types and species within a microbial community. This approach, called community editing, has the potential to track edited microbes and understand their functions within complex ecosystems.

SourceUniversity of California - Berkeley·JournalNature Microbiology·TypeExperimental study·DateDec 6, 2021

Host and resident bacteria join forces to control fungi in plant roots

A complex microbial community comprising bacteria, fungi, and oomycetes is beneficial for plant growth. Inactivation of the plant innate immune system shifts this balance, making the fungal load a primary cause of disease. Bacterial partners residing in roots provide an additional layer of protection.

SourceMax Planck Institute for Plant Breeding Research·JournalProceedings of the National Academy of Sciences·DateDec 2, 2021

For a fungus, the right “accessories” can make or break a relationship with a plant

A new study explores how plants respond differently to useful and harmful microbes, revealing that accessory chromosomes from fungal strains dictate these responses. Most plant genes are expressed similarly in response to both beneficial and pathogenic fungi, but with key differences occurring just 12 hours after interaction.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·TypeExperimental study·DateNov 23, 2021
Fluke 87V Industrial Digital Multimeter

Fluke 87V Industrial Digital Multimeter is a trusted meter for precise measurements during instrument integration, repairs, and field diagnostics.

Clover growth in Mars-like soils boosted by bacterial symbiosis

Researchers found that clover grown with symbiotic nitrogen-fixing bacteria in Martian regolith experienced significant 75% more root and shoot growth compared to uninoculated plants. However, the regolith showed no excess production of nitrogen compounds, suggesting a potential role for these microbes in terraforming Mars soils.

SourcePLOS·JournalPLOS ONE·TypeExperimental study·DateSep 29, 2021

Scientists uncover pathogen’s similar impact on two very different crops

Researchers investigate Pseudomonas cannabina pv. alisalensis (Pcal) interaction with cabbage and oats, discovering coronatine (COR) suppresses salicylic acid to aid pathogen growth. This finding opens doors to new disease control strategies.

SourceAmerican Phytopathological Society·JournalMolecular Plant-Microbe Interactions·TypeExperimental study·DateSep 20, 2021