A fish that entered a radically different environment 8,000 years ago didn’t just survive — it rewired how it reproduces.
A new study shows that Atlantic herring adapted to the Baltic Sea’s low-salinity waters through precise genetic changes that affected sperm, eggs and early embryos, offering a rare, detailed look at evolution in action.
The research, which was published in the Proceedings of the National Academy of Sciences , identifies four key genes that collectively enabled the species to reproduce successfully in brackish conditions — a critical step for long-term survival.
“The highly successful colonization of the Baltic Sea was a game changer for the ecosystem,” said Dr. Leif Andersson , professor in the Texas A&M College of Veterinary Medicine and Biomedical Sciences ’ Department of Veterinary Integrative Biosciences , who led the study. “Herring also played a critical role in food security throughout Northern Europe until more efficient agricultural systems were developed during the last century.”
The Baltic Sea presents a major challenge for marine species. Formed after the last glaciation — the process where glaciers form, advance, or alter landscapes — about 11,700 years ago, its salinity drops as low as 2–3 parts per thousand, a fraction of the 34–35 parts per thousand found in the open ocean.
For most marine fish, those conditions make reproduction nearly impossible.
“Adult fish have physiological mechanisms, such as kidneys, that help them handle variations in salinity,” Andersson said. “Sperm, eggs, and early embryos do not have those same mechanisms, so successful reproduction in low-salinity conditions required genetic adaptations to these new environmental conditions.”
Yet, Atlantic herring — which traditionally live in the North Atlantic Ocean — not only colonized the region but have become a keystone species, linking plankton production to larger fish, birds and marine mammals. The species also supports one of the most economically important fisheries in the surrounding countries.
To understand how this adaptation occurred, researchers sequenced and compared the genomes of Atlantic and Baltic herring.
What they found points to a critical vulnerability — and opportunity — in species that reproduce externally.
According to Andersson, because herring sperm, eggs and embryos develop outside the body, they are directly exposed to environmental conditions, making successful reproduction highly dependent on the ability to function in local water chemistry.
The study shows that natural selection targeted this life stage, driving genetic changes that allow reproduction to succeed despite low salinity.
The researchers also identified four major adaptations working together to support reproduction in brackish water.
One affects a sperm-specific ion channel, helping maintain sperm function under low-salinity conditions.
Two others alter proteins that form the egg’s protective outer layer, reinforcing it to prevent swelling when exposed to low-salinity water — but that added protection, however, creates a new challenge when it comes time for the larvae to hatch.
To solve it, Baltic herring evolved roughly 20 extra copies of a gene that produces an enzyme capable of breaking down the egg envelope, allowing larvae to emerge successfully.
The researchers found that all herring spawning in the Baltic Sea share these genetic traits, regardless of location, highlighting how essential they are for survival.
According to Andersson, the scale of the genetic differences that allowed Baltic herring to be a keystone species in the Baltic Sea may even justify reclassifying Baltic herring as a distinct species rather than a subspecies of Atlantic herring.
Beyond its evolutionary significance, the study has important implications for conservation and fisheries management.
As a keystone species, Baltic herring plays a central role in maintaining ecosystem balance while also supporting regional food systems and economies.
“Herring represents by far the largest fish biomass in the Baltic Sea, and our study shows that Baltic herring possess unique genetic adaptations that allow them to thrive in this low-salinity environment,” Andersson said. “These findings provide a strong argument for less aggressive industrial fishing practices to reduce the risk of losing important genetic diversity in this species.”
More broadly, the findings provide a clear example of how natural selection can drive rapid, targeted genetic change, offering insight into how other species may adapt to new or changing environments.
By Camryn Haines, Texas A&M University College of Veterinary Medicine and Biomedical Sciences
Proceedings of the National Academy of Sciences
Observational study
Animals
Sperm, egg, and embryo proteins critical for genetic adaptation of herring to low salinity in the Baltic Sea
11-May-2026
The authors declare no competing interest.