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Bioinformatics reveals new gene regulation system

A new transcription factor system in bacteria has been identified, which represses expression of genes involved in DNA replication. The system was discovered using comparative genomics and phylogenetic footprinting, revealing a highly conserved signal sequence and the regulatory transcription factor that binds it.

Vollum Institute discovery may unlock human genome

Scientists at the Vollum Institute have developed a technique to understand gene regulation, uncovering 6,300 regulatory regions that map to distinct sites on the genome. This breakthrough may help unravel the genomic instruction set governing gene expression in different cell types.

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UT Southwestern biochemist honored with NIH Director's Pioneer Award

Steve McKnight's research on gene regulation and the body's internal clock has led to discoveries that may help understand and treat insomnia and depression. The NIH Pioneer Award recognizes his innovative work in taking creative risks and achieving groundbreaking accomplishments.

In gene regulation, small is beautiful

Researchers create synthetic transcription factors, mimicking natural regulators to probe gene regulation and explore new treatment approaches. The artificial activation domains developed in Mapp's lab were as effective as a natural activation domain at turning on genes.

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Another key for the p53 door

YY1 regulates p53 at multiple levels, decreasing its amount in cells and blocking its interaction with cofactors. This discovery offers new targeting options for therapies to prevent transcription factors from interacting with other proteins.

Loss of circadian genes results in epilepsy

Scientists discovered that deleting three circadian genes in mice results in severe epilepsy and accelerated aging. The mice lacking all three genes are prone to epileptic seizures and display early mortality, with a significant increase in deaths on Mondays and Thursdays due to sound-induced attacks.

New genomics tool boosts diabetes research

Scientists have developed a new genomics tool that enables the efficient mapping of genome binding sites for transcription factors in human organs. This technology has been used to study the role of transcription factor HNF4 in type 2 diabetes, revealing its association with about half of all genes needed to make the pancreas and liver.

Scientists work to break cellular code

Researchers use genome-wide location analysis to study how a transcription factor Ste12 responds differently under various environmental conditions. By pinpointing the mechanism, scientists can make predictions of cellular behavior and potentially disrupt certain diseases at the cellular level.

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Scientists produce the script for life

Researchers at Whitehead Institute have created a global script describing how the yeast genome produces life, revealing the complex relationships between genes and proteins. This breakthrough allows for a vast network of interactions to be mapped, enabling targeted pharmaceutical approaches for diseases such as cancer.

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Tidying up transcription factors

Researchers James E. Darnell and Ali H. Brivanlou propose a reclassification of all known transcription factors, grouping them by their behavior rather than physical structure. This framework aims to provide a better understanding of how cells 'read' genetic instructions and may lead to new drug therapies for diseases such as cancer an...

How brain cells “remember” their birth order

Researchers found that Drosophila neural precursor cells sequentially activate four different transcription factors, allowing them to maintain differences based on their time of birth. This 'memory' is crucial for normal brain development and may have implications for understanding human neural development.

SAMSUNG T9 Portable SSD 2TB

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Yale researchers find all of the gene targets for a protein

Yale researchers have identified virtually all of the gene targets for a key protein, known as transcription factors, using new DNA chip technology. The study reveals that these proteins control cell proliferation in yeast and can be used to understand how cells become specialized.

Tailoring mitochondria to the cell's needs

Lehman et al. show that PGC-1 is limiting for mitochondrial proliferation in cardiac muscle, directing changes in mitochondrial population across cells. Overexpressing PGC-1 increases fatty acid oxidation capacity and coupled OxPhos, but constitutive expression leads to dilated cardiomyopathy.

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Science Article: Abnormal Gene Transcription And Acute Leukemia

Researchers at St. Jude Children's Research Hospital have discovered a novel leukemia-producing transcription factor called E2A-HLF, which transforms immature lymphocytes by preventing normal destruction programs. This finding provides a potential window into understanding leukemias that result from altered survival signals.