Articles tagged with Genome Diversity
Verkko software assembles gapless human genome sequences quickly and precisely, enabling better assessment of genomic diversity and comparative genomics. This innovation accelerates efforts to generate complete genome sequences of various species, improving research and discovery in the field.
The study found that genetic variants associated with height are concentrated in regions covering just over 20% of the genome. The variants identified explain 40% of the variation in height for people of European ancestry, and around 10-20% for those of non-European ancestry.
Researchers at the University of Zurich have successfully decoded the genome of Aldabrachelys gigantea, one of the world's two remaining giant tortoise species. The reference genome provides crucial information for breeding programs in zoos to represent genetic diversity and conservation efforts across East Africa and Madagascar.
The Global Biobank Meta-analysis Initiative has made significant advancements in expanding genome-wide association studies (GWASs) to include more diverse and representative data from around the world. By analyzing genomic data from over 2 million individuals across four continents, researchers have identified new genetic variants asso...
Researchers at Kyoto University have developed a new method to detect intraspecies genomic diversity, or microdiversity, of uncultivated bacteria. This approach allows for a more comprehensive understanding of microbial ecology and evolution, as previously overlooked variations are now being studied.
Researchers have discovered a selfish genetic element, known as Segregation Distorter (SD), that skews genetic inheritance. SD has caused dramatic changes in chromosome organization and genetic diversity, leading to the accumulation of deleterious mutations.
The study creates a catalogue of genomic diversity for endangered chimpanzees, allowing researchers to pinpoint the origin of confiscated animals within 100 kilometers. This information can support conservation efforts and combat the illegal trade of chimpanzees.
Researchers mapped out the natural history of drywood termites, revealing oceanic voyages that accelerated their evolution and confirmed recent dispersals via humans. The study also challenged the common assumption of primitive lifestyles, highlighting the diversity and complexity of termite social behavior.
A new study has shown that increasing genetic diversity can improve researchers' ability to identify important genetic markers for health conditions. The study, which analyzed data from over 470,000 Hispanic/Latino individuals, identified 42 previously unidentified regions of the human genome related to BMI, height, and waist-to-hip ra...
The T2T consortium's completed human genome has shown significant improvements in DNA sequencing accuracy, correcting tens of thousands of errors and revealing millions of genetic variations. This new reference genome can support the analysis of over 200 genes of medical relevance, potentially propelling research into genetic disorders.
Scientists developed a powerful new tool called Giraffe to improve genomic research by leveraging global genetic diversity. The tool allows for the use of a diverse pangenome reference point, enabling faster and more sensitive comparisons of short-read human genome sequences.
Researchers studied Indriidae lemurs to understand the impact of climate, body size, and color vision on hair evolution, providing a unique window into human hair evolution. The study fills gaps in our understanding of human evolutionary story by comparing non-human primate hair patterns.
The Colorado potato beetle has evolved rapid resistance to insecticides by leveraging its existing genetic diversity, allowing different populations to quickly adapt and overcome new chemicals. This wealth of diversity will likely make the pest difficult to control in the future.
A new genomics study has helped guide the development of vaccines against Shigella, a leading cause of severe diarrhoea in children. The research revealed the extent of genomic diversity among Shigella species, highlighting challenges to current vaccine approaches.
A new study explores how plants respond differently to useful and harmful microbes, revealing that accessory chromosomes from fungal strains dictate these responses. Most plant genes are expressed similarly in response to both beneficial and pathogenic fungi, but with key differences occurring just 12 hours after interaction.
A new study has catalogued all possible genetic variations in over 3,000 chickpea plants to improve the crop's yield and resilience to climate change. The research proposes a breeding model using genomics-assisted breeding to enhance agriculturally valuable traits.
A new study reveals hepatitis B virus (HBV) has been infecting humans for millennia, tracing its evolution from prehistory to the present. The research highlights HBV's dispersal routes and shifts in viral diversity mirroring human migrations and demographic events.
Scientists analyzed genomes of East Asian citrus varieties and found a new citrus species native to Okinawa that arose about two million years ago. This discovery may have commercial implications and opens the potential to create additional hybrids with favorable traits.
A new analysis of the California condor's complete genome reveals a wealth of genetic diversity, which can aid in its long-term survival. The study found that the species' historical abundance contributed to its high genetic diversity, making it less susceptible to inbreeding and disease.
Researchers found that only a few patients carried many variants of the virus, which were often lost at transmission, but some initiated ongoing transmission and wider dissemination. Continued monitoring is necessary to understand viral adaptation and patterns of spread.
Research sequenced 65 tiger genomes revealing strong genetic differences between subspecies, which emerged recently due to climatic shift and human dominance. Conservation genomics can inform management strategies, highlighting the need for genetic rescue through hybridization or selection of adapted traits.
Cell Press launches a new initiative to promote inclusion and diversity in research, allowing authors to share their efforts in paper statements. The pilot program will track progress and provide data for benchmarking goals, aiming to increase diversity and monitor outcomes.
The study identified over 3 million novel variants in African genomes, showcasing the continent's vast genetic diversity. It also revealed complex patterns of ancestral mixing and natural selection, shedding light on population history, environmental adaptation, and disease susceptibility.
Scientists analyzed extinct and living lions' genomes to determine when species diverged, finding modern Indian lions lack genetic diversity due to inbreeding. This reduction threatens the species' survival, making conservation efforts crucial.
The study found that wild and domesticated cotton genomes are remarkably similar, with less diversity between species than within humans or cells. This limits the ability to introduce beneficial traits like disease resistance through gene mining.
A newly developed wheat variety contains higher levels of fructans, a naturally occurring carbohydrate that can promote healthy gut bacteria. The breeders used genomic selection to reduce the development time and cost of creating such a high-fructan wheat variety.
A recent study led by JGI uncovered a broad diversity of large and giant viruses belonging to the NCLDV supergroup. The genomes of these viruses are significantly larger than previously known, with some being up to 100 times the size of typical viruses.
Researchers reconstructed the beetle family tree, estimating timing and rates of diversification. Beetle genes facilitating herbivory were acquired through horizontal transfer from fungi and bacteria, enabling adaptability to flowering plants.
A recent study has analyzed the genomes of nearly 50,000 non-European individuals to maximize genetic discovery and lessen clinical disparities. The study revealed nearly 1,500 associations between genes and disease in minority populations, providing valuable insights into the genetic underpinnings of disease affecting non-whites.
Researchers sequenced the narwhal genome, finding low genetic diversity despite the species' abundance. The findings challenge the notion that high genetic diversity is necessary for survival.
The Human Genetics Scholars Initiative aims to increase workforce diversity in human genetics research by providing intensive mentoring, skill-building, and community-building opportunities. The program will support up to 240 diverse young researchers over five years.
The lack of diversity in genomic data from biobanks worldwide, with 68% coming from European ancestry, limits the ability to identify associations between genetic variants and disease. To overcome this, Mount Sinai researchers advocate for increasing ethnic diversity in genomic sampling and research.
Researchers found that Human Cytomegalovirus (HCMV) has a lower mutation rate than previously believed, contradicting theories of high genetic diversity. This discovery could pave the way for the development of an effective HCMV vaccine.
Researchers have developed a single-cell genomics approach to explore unknown fungal diversity, revealing essential metabolism genes and insights into phylogenetic position. The study successfully reconstructed near-complete fungal genomes from environmental samples, shedding light on the cryptic biology of unculturable species.
A genomics study in Africa discovered that the genetic diversity and admixture of pygmies and Bantu-speaking farmers affected deleterious mutations. The researchers found similar burdens of mutations in both groups, despite different lifestyles.
Researchers have shed new light on the diversity paradox by developing a stochastic model of bacteria-virus interactions. Their findings suggest that the coevolutionary arms race between bacteria and viruses leads to diverse populations and boom-bust cycles, preventing any single species from dominating the ecosystem.
A pioneering study of invertebrates has uncovered 1445 viruses, including several new families, revealing people have only scratched the surface of the world of viruses. The research, led by Professor Edward Holmes, suggests these viruses have been associated with invertebrates for potentially billions of years.
Researchers analyzed genetic data from 3,726 African-Americans to estimate patterns of ancestry, finding that 82.1% had ancestors in Africa prior to transatlantic travel. The study reveals regional differences in ancestry, with southern US residents having a greater percentage of African ancestry than those in the North or West.
Researchers found that people tend to choose mates with similar genomic ancestries, leading to stronger assortative mating patterns. This phenomenon may have implications for genetic disease perpetuation and health benefits.
Marine viruses and microbes interact on a global scale, driving ecological processes and producing half of the oxygen we breathe. A study by an international team led by University of Arizona scientists reveals how viral communities maintain high regional diversity through passive transport by ocean currents.
A recent study published in Investigative Genetics found that the genomic diversity of the Dutch population follows a southeast-to-northwest gradient, with the population separated into four geographic groups. The researchers propose that this pattern is due to recent movement within the last 2000 years, rather than ancient events.
Researchers at EMBL discovered that each gene can be transcribed into dozens or hundreds of unique mRNA molecules with different boundaries, affecting gene function and protein production. This variation could equip cells to adapt to external challenges.
The NIH Director's Early Independence Awards (EIA) program allows exceptional junior investigators to bypass traditional post-doc training and establish independent research careers immediately. The first recipients, 10 outstanding young scientists, will receive $19.3 million in funding over five years.
A new study using global ocean samples has revealed a vast array of microbial diversity, with the largest genomic dataset ever compiled. This massive data set includes over 6 billion base pairs of genetic material from marine microbes, which have been classified into thousands of distinct families.
A genetic analysis by Francisco Salzano and colleagues supports Rodrigues' suggestion of a close connection between Carib and Tupi, while Je and Maipure show more distant relationships. The study provides new insights into the complex history of South American Native languages.
A genetic mutation in the ABCA3 gene is linked to severe surfactant deficiency in infants, leading to fatal lung disease. Researchers found mutations in 16 infants, with 15 dying from their illness, and discovered a potential mechanism for the defective transport of phospholipids critical for surfactant function.
Research found giant pandas have moderate genetic diversity compared to other carnivores, with some populations showing signs of isolation. To ensure the species' survival, conservation efforts focus on restoring gene flow among populations through natural corridors and ecological restoration.