Articles tagged with Genomics
Comprehensive exploration of living organisms, biological systems, and life processes across all scales from molecules to ecosystems. Encompasses cutting-edge research in biology, genetics, molecular biology, ecology, biochemistry, microbiology, botany, zoology, evolutionary biology, genomics, and biotechnology. Investigates cellular mechanisms, organism development, genetic inheritance, biodiversity conservation, metabolic processes, protein synthesis, DNA sequencing, CRISPR gene editing, stem cell research, and the fundamental principles governing all forms of life on Earth.
Comprehensive medical research, clinical studies, and healthcare sciences focused on disease prevention, diagnosis, and treatment. Encompasses clinical medicine, public health, pharmacology, epidemiology, medical specialties, disease mechanisms, therapeutic interventions, healthcare innovation, precision medicine, telemedicine, medical devices, drug development, clinical trials, patient care, mental health, nutrition science, health policy, and the application of medical science to improve human health, wellbeing, and quality of life across diverse populations.
Comprehensive investigation of human society, behavior, relationships, and social structures through systematic research and analysis. Encompasses psychology, sociology, anthropology, economics, political science, linguistics, education, demography, communications, and social research methodologies. Examines human cognition, social interactions, cultural phenomena, economic systems, political institutions, language and communication, educational processes, population dynamics, and the complex social, cultural, economic, and political forces shaping human societies, communities, and civilizations throughout history and across the contemporary world.
Fundamental study of the non-living natural world, matter, energy, and physical phenomena governing the universe. Encompasses physics, chemistry, earth sciences, atmospheric sciences, oceanography, materials science, and the investigation of physical laws, chemical reactions, geological processes, climate systems, and planetary dynamics. Explores everything from subatomic particles and quantum mechanics to planetary systems and cosmic phenomena, including energy transformations, molecular interactions, elemental properties, weather patterns, tectonic activity, and the fundamental forces and principles underlying the physical nature of reality.
Practical application of scientific knowledge and engineering principles to solve real-world problems and develop innovative technologies. Encompasses all engineering disciplines, technology development, computer science, artificial intelligence, environmental sciences, agriculture, materials applications, energy systems, and industrial innovation. Bridges theoretical research with tangible solutions for infrastructure, manufacturing, computing, communications, transportation, construction, sustainable development, and emerging technologies that advance human capabilities, improve quality of life, and address societal challenges through scientific innovation and technological progress.
Study of the practice, culture, infrastructure, and social dimensions of science itself. Addresses how science is conducted, organized, communicated, and integrated into society. Encompasses research funding mechanisms, scientific publishing systems, peer review processes, academic ethics, science policy, research institutions, scientific collaboration networks, science education, career development, research programs, scientific methods, science communication, and the sociology of scientific discovery. Examines the human, institutional, and cultural aspects of scientific enterprise, knowledge production, and the translation of research into societal benefit.
Comprehensive study of the universe beyond Earth, encompassing celestial objects, cosmic phenomena, and space exploration. Includes astronomy, astrophysics, planetary science, cosmology, space physics, astrobiology, and space technology. Investigates stars, galaxies, planets, moons, asteroids, comets, black holes, nebulae, exoplanets, dark matter, dark energy, cosmic microwave background, stellar evolution, planetary formation, space weather, solar system dynamics, the search for extraterrestrial life, and humanity's efforts to explore, understand, and unlock the mysteries of the cosmos through observation, theory, and space missions.
Comprehensive examination of tools, techniques, methodologies, and approaches used across scientific disciplines to conduct research, collect data, and analyze results. Encompasses experimental procedures, analytical methods, measurement techniques, instrumentation, imaging technologies, spectroscopic methods, laboratory protocols, observational studies, statistical analysis, computational methods, data visualization, quality control, and methodological innovations. Addresses the practical techniques and theoretical frameworks enabling scientists to investigate phenomena, test hypotheses, gather evidence, ensure reproducibility, and generate reliable knowledge through systematic, rigorous investigation across all areas of scientific inquiry.
Study of abstract structures, patterns, quantities, relationships, and logical reasoning through pure and applied mathematical disciplines. Encompasses algebra, calculus, geometry, topology, number theory, analysis, discrete mathematics, mathematical logic, set theory, probability, statistics, and computational mathematics. Investigates mathematical structures, theorems, proofs, algorithms, functions, equations, and the rigorous logical frameworks underlying quantitative reasoning. Provides the foundational language and tools for all scientific fields, enabling precise description of natural phenomena, modeling of complex systems, and the development of technologies across physics, engineering, computer science, economics, and all quantitative sciences.
The Cumming Global Centre for Pandemic Therapeutics is offering global grants of up to $200,000 per annum for three years to develop novel therapeutics for pathogens of pandemic potential. Researchers are invited to submit expressions of interest for Round Two of the Foundation Grants program.
A new study has identified specific genes associated with diet and brain structure in kingfishers, which are capable of diving at high speeds. The findings suggest that these birds have evolved unique traits to protect their brains from concussive forces.
A new study confirms the presence of deadly Vibrio bacteria in Florida's coastal waters following Hurricane Ian. The research, led by University of Maryland senior author Rita Colwell, found high levels of pathogenic Vibrio parahaemolyticus and Vibrio vulnificus, particularly in oyster samples from Lee County.
A study involving 119,606 Chinese newborns found that concurrent hearing and high-throughput genetic screening significantly enhances congenital hearing loss management. The detection rate of certain gene mutations was also reported, highlighting the importance of considering multiple factors for accurate diagnosis.
A massive research consortium has created the largest human brain cell atlases to date, revealing over 3,000 different kinds of brain cells. This breakthrough study provides new insights into the cellular organization of the human brain and its modular, functional nature.
A new study provides comprehensive genomic resources for pangolins, helping protect these threatened mammals from extinction due to habitat loss and trafficking. The data will aid in conservation priorities and management plans, as well as tracing the pangolin trade.
A new DNA sequencing test revealed a novel species with an unusual genetic code, where TAA and TAG specify different amino acids. This finding breaks some long-held rules about gene translation, highlighting the complexity and diversity of life on Earth.
The Keck School of Medicine of USC has launched a five-year, $50.3 million multi-omics study to better understand the causes and prevention of various diseases, including NAFLD, in underrepresented racial and ethnic groups.
A team of University of Connecticut undergraduates has published the first full map of the butternut's DNA, a process that could help conserve endangered species. The project is part of an ambitious effort to sequence the DNA of overlooked organisms, including deep-sea corals and critically endangered birds.
The African BioGenome Project's Open Institute hosts widely-attended workshops across Africa, fostering grassroots knowledge exchange and developing biodiversity genomics and bioinformatics curricula. Over 700 participants learned about cutting-edge technologies shaping the biodiversity and genomics field.
A study of nearly 500,000 participants found that smoking shortens telomere length in white blood cells, a indicator of aging and cell regeneration. The more cigarettes smoked, the stronger the shortening effect, suggesting a link between smoking and accelerated aging.
A study of 1.3 million people found that those with hospital-treated depression have a high risk of developing conditions like bipolar disorder, schizophrenia, and anxiety disorders. Genetic analysis also revealed a link between depression and reduced cognitive abilities, such as abstract thinking and mental flexibility.
The team successfully completed the sequencing of the Y chromosome using long-read sequencing technology and innovative computational assembly methods. This achievement adds 41 additional protein-coding genes and provides crucial insight into reproduction, evolution, and population change.
A recent NIH-supported study found a significant association between a genetic variant in people of African ancestry and an increased risk of developing Parkinson's disease. The variant, in the GBA1 gene, is associated with a higher risk of 3.5 times for those carrying two copies.
Researchers have identified genetic variants and structural patterns that contribute to the development of Bartter syndrome type 3, a rare kidney disease. The study's findings may lead to better diagnostic and treatment options for affected individuals.
Researchers at the University of Pennsylvania School of Engineering and Applied Science have discovered dozens of small protein sequences with antibiotic qualities in extinct organisms like Neanderthals and Denisovans. They then synthesized these molecules using artificial intelligence and tested their efficacy against pathogens.
A new study reveals that Ötzi had a Mediterranean-European skin tone and little to no Eastern European ancestry. His hair was likely sparse, with a predisposition to baldness. The research team used advanced sequencing technology to analyze Ötzi's genome, which has more Anatolian farmer ancestry than any of his European contemporaries.
Researchers at the University of Missouri have developed a new method using nanopores to advance discoveries in neuroscience and medical applications. The technique allows for real-time detection of dynamic aptamer-small molecule interactions, which can aid in understanding DNA and RNA diseases and drug discovery.
Research by the Peter Doherty Institute found that inflammation alters plasma composition, hindering parasite maturation. This work reveals a new mechanism slowing down malaria parasite development in the bloodstream.
Genome analysis reveals that hulled and naked oat varieties were domesticated independently around 51,000 years ago. The study found higher genetic diversity in naked oat compared to hulled oat, contradicting the long-held assumption of a recent mutation.
The Biodiversity Knowledge Hub (BKH) is a one-stop portal providing access to FAIR biodiversity data and services. It enables researchers to navigate linked data, tools, and services across the entire biodiversity research cycle.
Researchers have created a detailed human Heart Cell Atlas, providing new insights into the heart's conduction system and cell communication. The study also introduces a drug-repurposing tool, Drug2cell, which can predict drug targets and side effects.
A genome-wide screen in C. elegans reveals potential targets to delay motor aging, including VPS-34 inhibition. Partial inhibition improves neurotransmission and muscle integrity, ameliorating motor aging in worms and mice.
Researchers discovered that a tiny sea creature, Hydractinia, regenerates its entire body with help from aging cells, providing insights into the interconnectedness of healing and aging. The study suggests that senescence may have evolved as a regeneration mechanism in ancient animals.
Researchers confirm Bachman's warbler as a distinct species by sequencing its genome from museum specimens. The study reveals a new candidate gene involved in feather pigmentation in the group. Comparing the genomes of the extinct warbler with living sister species highlights the crucial role of museum collections in science.
A biologist at Binghamton University has developed a new method to uncover the parent species of hybrid plants and animals. By examining genomic patterns within these hybrids, researchers can identify distinct ancestries and determine the order in which chromosomes were inherited from their progenitor species.
Researchers identified candidate genes and loci associated with aquaculture-relevant traits in tilapia, providing valuable insights to breed more resilient fish. The findings aim to guide selective breeding programmes and enhance the climate resilience of freshwater aquaculture.
Researchers at UC San Diego found that squid employ RNA recoding to change amino acids in molecular motors, improving their function in colder waters. This process allows cephalopods to adapt to changing environmental conditions and survive in a broad range of ocean temperatures.
The Human Lung Cell Atlas provides insights into lung biology by combining data from nearly 40 studies, revealing rare cell types and cellular differences between healthy people. The study found common cell states between lung fibrosis, cancer, and COVID-19, offering new ways of understanding lung disease.
Researchers, led by Elizabeth King, aim to develop a knowledge base on complex genetic traits using fruit fly models. The project seeks to address the scientific knowledge gap in this field by focusing on interconnectedness among multiple factors.
Three Amazonian Morpho butterfly species have been sequenced for the first time, revealing genetic differences that maintain reproductive isolation despite sympatry. The study found Z-chromosome rearrangements and genetic divergence among gene copies, suggesting a role in speciation.
The Newborn Screening Translational Research Network (NBSTRN) is marking its 60th anniversary with a two-day virtual meeting celebrating advocacy and research in newborn screening. The event will showcase the expansion of NBS to over 80 conditions through new screening, diagnostic technologies, and therapies.
The human pangenome reference combines genetic material from 47 individuals, enabling a deeper and more accurate understanding of worldwide genomic diversity. This improves the detection of variants in the human genome, particularly structural variants that can have important health implications.
The UC Santa Cruz Genomics Institute will run the Data Coordination Center for the Scalable and Systematic Neurobiology of Psychiatric and Neurodevelopmental Disorder Risk Genes (SSPsyGene) Consortium. The team will coordinate an initial selection of 250 relevant genes from nearly 30,000 protein coding genes in the human genome.
A new study reveals that analyzing DNA can help predict which animals are most at risk of extinction. By examining the genomes of 240 mammal species, scientists found that those with smaller historical populations carry higher burdens of damaging mutations and are more likely to face extinction.
The American College of Medical Genetics and Genomics (ACMG) has published a statement addressing factors that contribute to bias in clinical genetic testing. The statement highlights three main areas: environmental, clinical, and technical biases, which affect health equity for individuals from historically marginalized populations.
A new study reveals a protein in the nervous system regulates collagen expression, potentially extending human lifespan as temperatures rise. Mutant worms with increased collagen production lived longer and looked younger than wild-type worms under warm temperatures.
Researchers teamed with Ethiopian farmers to develop new wheat varieties using genomic analysis. Farmers' knowledge played a crucial role in predicting crop yields and selecting optimal traits. The project aims to preserve agrobiodiversity and promote cultural heritage.
Researchers identified high expression of glypican-1 in primary solid tumors, correlating with poor prognosis in various cancer types. Suppression of GPC1 attenuated cancer cell proliferation, suggesting its potential as a novel diagnostic tool and target for therapy.
ISB researchers constructed a biological body mass index that offers a more accurate representation of metabolic health. The team found that even with no weight loss, individuals can be getting healthier biologically through positive lifestyle changes.
Researchers have successfully used AAV1.NT-3 gene therapy to improve muscle physiology and prevent age-related sarcopenia in mice. The treatment resulted in restored muscle mass, strength, and neural connections, offering a potential new option for managing this debilitating condition.
Molecular biologist Shixin Liu is recognized for developing cutting-edge biophysical tools to visualize and understand biomolecular machines. His work aims to establish a quantitative input-output relationship between environmental stimuli and gene expression profiles.
Researchers discovered that fruit flies have distinct hunger drives, one driven by need and the other by pleasure, which arise from unique neural mechanisms. The study found that hungry flies increase feeding event duration and total events, and identified specific brain regions activated by pleasurable food environments.
Researchers at Rutgers University used artificial intelligence to analyze genes associated with cardiovascular disease, identifying key factors such as age, gender, and race. The study aims to accelerate early diagnosis and treatment of conditions like atrial fibrillation and heart failure.
Researchers at NIH's National Human Genome Research Institute identified a gene, KTD1, that provides resistance to the K28 toxin in yeast. This discovery sheds light on the molecular mechanisms underlying toxin resistance and has implications for understanding human toxin resistance.
Verkko software assembles gapless human genome sequences quickly and precisely, enabling better assessment of genomic diversity and comparative genomics. This innovation accelerates efforts to generate complete genome sequences of various species, improving research and discovery in the field.
Researchers examined three epigenetic age acceleration measurements and found inverse associations with lung cancer risk in men and younger participants. However, these findings did not support a positive association between epigenetic age measures and lung cancer risk in the study.
A study analyzed gene expression data from 46 different human tissues to understand the impact of circadian and circannual cycles on human health. The research revealed that certain genes have strong diurnal or seasonal preferences, which could inform effective diagnostic and therapeutic strategies.
Researchers identified a rare neurological disease in three children associated with mutations in the ATG4D gene, which plays a crucial role in cellular recycling. The study suggests that this genetic variation may lead to insufficient cellular recycling, causing speech and motor impairment.
Researchers at Rice University's Center for Theoretical Biological Physics discovered Aedes aegypti's chromosomes have a unique 'liquid crystal' structure, unlike other species. This finding may provide insights into the functioning of genomes and gene regulation.
A team of researchers developed an AI-based method called m6Anet to accurately predict chemical modifications of RNA molecules from genomic data. This enables the detection of RNA modifications in clinical samples and understanding their role in diseases such as cancer.
A study by Pusan National University researchers found that countries closer to the equator have higher suicide rates due to decreased sunlight exposure. The prevalence of suicide increased with latitude, and was found to be higher in men than women, with age also being a significant factor
A single test can now identify all three genotypes of the Infectious Spleen and Kidney Necrosis Virus (ISKNV), a deadly virus that primarily affects fish. The development of this test has significant implications for fisheries and aquaculture, as ISKNV poses a substantial threat to these industries.
Scientists have identified genes that play key roles in the development of coronary artery disease (CAD), a leading cause of death worldwide. The study found notable differences in gene activity between males and females, as well as between cells that were multiplying and those that were not.
Scientists have identified horizontally transferred genes in insect genomes as valid targets for selectively killing green peach aphids and whiteflies. Silencing these genes using RNA interference reduces pest survival by up to 40%, with potential expansion to other insects through 'stacking' multiple targets.
Research from Brigham and Women's Hospital found that genetic analysis can identify up to 65% more A2 donors, increasing potential kidney transplants for recipient candidates with blood type B. This could improve availability and equity in kidney transplantation.
A new toolkit enables researchers to map individual RNA data to a more diverse 'pantranscriptome', addressing reference bias and increasing the accuracy of gene expression mapping. This approach builds on pangenomics, allowing for the comparison of an individual's genome to genetically diverse cohorts of reference sequences.
A study reveals that endogenous retroviruses awaken during aging, leading to cellular senescence and acceleration of aging. Researchers propose a new theory of programmed and contagious aging induced by ERV resurrection.
The São Paulo School of Advanced Science on Epidemic Preparedness will bring together researchers from various fields to discuss core tracks such as mathematical modeling, genomics, epidemiological surveillance, and public health policies. Participants will engage in simulated situation rooms and hands-on experience with leading faculty.
Scientists from CHOP and NJIT created a software tool to analyze information from a single cell, revealing relationships between different cellular characteristics. The 'single-cell multimodal deep clustering' method can help identify the causes of genetic-based diseases by integrating data on gene expression, mRNA, proteins, and organ...