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Study suggests skipping sweets during antibiotic treatment may help protect the gut microbiome

A large clinical study found that patients who consumed more sweets while taking antibiotics experienced a greater loss of microbiome diversity, with a 24% drop in bacterial diversity for every 100-gram increase in sweets. Preserving microbiome diversity has been linked to improved clinical outcomes for cancer patients.

SourceCity of Hope·JournalNature·TypeRandomized controlled/clinical trial·DateSep 30, 2026

KAIST develops a genetic switch that works in both bacteria and yeast

A KAIST research team has developed a genetic switch that works in both bacteria and yeast, allowing for controlled production of a green pigment in both microbes. The hybrid promoter system can be used to select the microbe best suited for producing a target compound, reducing the need for redesigning control elements.

Novel database reveals hidden diversity and potential of deep-sea microbes

Scientists have created the first global atlas of single-cell microbes living in the aphotic ocean, revealing unexpected functions and capabilities among deep-sea microorganisms. The new database, GORG-Dark, contains over 9,600 genomes from individual microbial cells collected across a broad range of depths and locations.

SourceBigelow Laboratory for Ocean Sciences·JournalCell·TypeData/statistical analysis·DateSep 16, 2026

What happens when a shoreline scavenger consumes microplastics?

Researchers found altered gene expression in wharf roach guts after consuming expanded polystyrene, but no significant impact on lifespan. The gut microbiome showed little change, but rare microbes were detected in EPS-fed specimens. This highlights the need to manage EPS waste carefully and prioritize coastal cleanup efforts.

SourceKyushu University·JournalMarine Pollution Bulletin·TypeExperimental study·DateSep 4, 2026

Loss of kelp forests reverberates down to microbial level

A new study reveals that the loss of kelp forests has a significant impact on microbial levels, leading to changes in ecosystem functioning and potentially affecting human services such as nutrient retention and carbon storage. The research highlights the importance of considering the microbial component in understanding ecosystem change.

SourceBigelow Laboratory for Ocean Sciences·JournalProceedings of the National Academy of Sciences·TypeObservational study·DateAug 31, 2026

Burying crop residues deeper could help protect maize from ear rot and mycotoxins

A three-year field study found that deeper straw incorporation reduced maize ear rot and mycotoxin contamination while improving soil health and microbial communities. The study suggests that optimizing straw management strategies could turn a familiar practice into a more effective tool for soil health and food safety.

SourceShenyang Agricultural University Collaborative Journals·JournalAgricultural Ecology and Environment·TypeExperimental study·DateAug 18, 2026

Highly reliable LFIA based on selenium nanoparticle reveals long-term real-world dynamics of neutralizing antibodies against SARS-CoV-2

A novel LFIA based on selenium nanoparticles reveals long-term dynamics of neutralizing antibodies against SARS-CoV-2, showing accelerated antibody decline in patients with neurological and hematological diseases. The detection platform enables automated result readout and scalable monitoring for large populations.

SourceScience China Press·JournalScience Bulletin·TypeExperimental study·DateJul 30, 2026

AI and robotics accelerate search for better gut microbiome therapies

Researchers at Duke University have developed a method to systematically develop novel probiotic and prebiotic combinations to maintain gut health and treat gastrointestinal diseases. The approach uses machine learning and automation to explore complex interactions between microbes, nutritional sources, and the environment.

SourceDuke University·JournalNature Chemical Biology·TypeExperimental study·DateJul 27, 2026

Engineered microbial communities offer a faster route to removing herbicide residues from soil

Researchers develop synthetic microbial communities to degrade persistent herbicides, improving degradation rates by 1.5-3 times compared to individual strains or natural attenuation. The approach promotes more complete mineralization of pollutants and resilience in complex soil environments.

SourceShenyang Agricultural University Collaborative Journals·JournalAgricultural Ecology and Environment·TypeLiterature review·DateJul 27, 2026

How changing environments can preserve an ancient microbial survival strategy

Researchers found that alternating periods of nutrient-rich conditions and starvation can stabilize a self-destructive survival strategy in yeast, allowing it to persist for hundreds of millions of years. This theory suggests that changing environments play a crucial role in shaping the evolution of complex ecological strategies.

SourceInstitute of Science Tokyo·JournalJournal of The Royal Society Interface·TypeComputational simulation/modeling·DateJul 27, 2026

Floating colonies: engineering three-dimensional microbial architectures in liquid cultures

A new liquid-based platform called 'floatony' can form and maintain complex three-dimensional microbial structures while preserving molecular diffusion, spatial structures, and cell mobility. This approach could offer new ways to study gut microbiota, biofilms, and other spatially organized microbial communities.

SourceInstitute of Science Tokyo·JournalBiofabrication·TypeExperimental study·DateJul 27, 2026

Fructooligosaccharide alleviate hyperuricemia: Gut microbial interactions drive uric acid degradation via a novel mechanism

Researchers discovered that fructooligosaccharide induces the selective enrichment of Anaerotruncus colihominis, a UA-degrading bacterium, via modulation of the gut microbiota. This interaction alleviates oxidative damage to the kidney and offers a new therapeutic rationale for prebiotic-based management of hyperuricemia

SourceScience China Press·JournalScience Bulletin·TypeExperimental study·DateJul 21, 2026

Helpful microbes could battle pathogens in our hospitals and schools - with the help of AI to make it work

Researchers explored how AI and metabolic modeling can inform effective biocontrol strategies to combat antimicrobial resistance in built environments. Microbial biocontrol using 'good' microbes has shown promise, but inconsistent outcomes are due to various factors, including genetic differences and environmental stressors.

SourceApplied Microbiology International·JournalJournal of Applied Microbiology·DateJul 15, 2026

Emerging tick-borne virus raises concern

Researchers uncover how a family of tick-borne viruses, known as orthonairoviruses, evade the immune system by manipulating cellular communication pathways. This study highlights a significant pandemic risk posed by these viruses and emphasizes the need for continued surveillance and preparedness.

SourceUniversity of California - Riverside·JournalACS Infectious Diseases·TypeExperimental study·DateJul 14, 2026

Soil moisture may decide whether fertilizer nitrogen feeds crops or fuels hidden soil pollution

A new study published in Environmental and Biogeochemical Processes shows that changing soil water levels can disrupt the balance between two key steps of nitrification, a central process in the soil nitrogen cycle. Soil moisture and nitrogen availability jointly control the microbial 'handoff' in agricultural soil nitrogen cycling.

SourceShenyang Agricultural University Collaborative Journals·JournalEnvironmental and Biogeochemical Processes·TypeExperimental study·DateJul 6, 2026

Gut fungi may hold the key to treating Asthma worldwide

Two studies found that certain fungal species in the gut play a key role in immune dysregulation and pediatric allergic diseases, positioning the infant mycobiome as a promising target for therapies. Infants' early-life antibiotic use may have a direct impact on these fungi, leading to immune dysregulation and allergic asthma.

SourceUniversity of Calgary·JournalNature Communications·TypeData/statistical analysis·DateJun 23, 2026

Postbiotic foods for improving gum health

Researchers from Institute of Science Tokyo found that postbiotic foods can improve gum health in adults with mild gingivitis, reducing gum bleeding and inflammation. The study suggests a simple way to support oral health without altering oral care habits.

SourceInstitute of Science Tokyo·JournalJournal of Periodontology·TypeExperimental study·DateJun 17, 2026

From microbial dark matter to living library: New biobank decodes survival secrets of extreme acid mine drainage microbes

A new culturomics-driven biobank, the Microbial Biobank of Acid Mine Drainage (mbAMD), has been established to decode the survival secrets of extreme acid mine drainage microbes. The collection contains 652 isolates spanning 42 species, including 21 novel taxa, and covers 86.7 percent of the global AMD core microbiome.

SourceChinese Society for Environmental Sciences·JournalEnvironmental Science and Ecotechnology·DateJun 17, 2026

Organized microbial ‘workforces’ keep Earth’s underground biosphere running

Researchers tracked microbial community shifts across six sites over four years and discovered that each site had its own stable microbial community. These communities were organized around two broad groups of microbes, with stable microbes maintaining core processes and responsive microbes capitalizing on new opportunities.

SourceNorthwestern University·JournalJournal of Geophysical Research Biogeosciences·TypeExperimental study·DateJun 3, 2026

Extreme adaptation helps Dead Sea single-celled organisms to swim

Researchers discovered a structural adaptation supporting the survival and mobility of a Dead Sea single-celled organism in harsh environments. The archaeal filament, powered by a membrane-anchored protein motor, is stiffened and strengthened with a unique outer sheath structure to facilitate movement in viscous conditions.

SourceOkinawa Institute of Science and Technology (OIST) Graduate University·JournalNature Communications·TypeImaging analysis·DateJun 3, 2026

Clarifying the interplay between host and gut microbiota in selenium metabolism

Researchers investigated the interplay between host and gut microbiota in selenium metabolism, finding that gut microbiota transform selenium into metabolites influencing utilization, detoxification, and excretion. The study also revealed that Se intake affects bacterial diversity and that gut microbes produce unique selenometabolites.

SourceChiba University·JournalFood Bioscience·TypeExperimental study·DateJun 1, 2026

You are what you eat — or are you?

A new mathematical model developed by Arizona State University researchers estimates how much of the calories people absorb from food, considering the role of gut microbes. The model, DAMM, suggests that short-chain fatty acids produced by gut microbes contribute to an average of about 140 calories per day.

SourceArizona State University·JournalPLOS One·TypeObservational study·DateMay 27, 2026

Revealing hidden diversity of algae in farmland

A pilot study discovered over 100 different algae species in German farmland, with blue-green and green algae prevalent during summer, and yellow-green algae during spring and autumn. The research highlights the importance of soil algae in maintaining soil health and fertility.

SourceUniversity of Göttingen·JournalFrontiers in Microbiology·TypeObservational study·DateMay 18, 2026

PolyU research reveals hidden health risks from urban airborne microbes: low concentration of bacterial toxins may trigger nearly 20% of inflammatory responses, while drug-resistant fungi may spread with the wind

A PolyU research team discovered that low concentrations of bacterial toxins in urban air can trigger nearly 20% of inflammatory responses, while drug-resistant fungi may spread through everyday breathing or skin contact. The study highlights the need to identify and control these highly toxic trace components to effectively reduce hea...

SourceThe Hong Kong Polytechnic University·JournalEnvironmental Science & Technology·DateMay 6, 2026

“Not just hot water”: marine heatwaves can create toxic relationship between seagrasses and microbes

Researchers found a diverse bacterial ecosystem in seagrass habitats that was disrupted by increased water temperature, leading to reduced seagrass biomass and tolerance to climate change. The study highlights the importance of considering microbial communities in understanding marine plant responses to environmental stress.

SourceUniversity of Sydney·JournalNew Phytologist·DateMay 6, 2026

How yeast find the perfect match

A mass mating event among yeast strains revealed specific preferences for partner selection. The study showed that yeast tend to choose partners that produce fitter offspring, with successful pairs exhibiting reduced genetic distance. This suggests an ancient and fundamental mechanism for mate choice in sexual reproduction.

SourceWeizmann Institute of Science·JournalCell Reports·DateApr 30, 2026

From precision intervention to a “virtual gut”: how close are we to predicting and steering the human microbiome?

Researchers are close to building a 'virtual gut' capable of predicting responses to diet, drugs, and microbiome-based therapies. A new review outlines an analytical framework for host-microbiome multi-omics studies, covering preprocessing, feature selection, data integration, predictive modeling, and evaluation.

SourceScience China Press·JournalScience China Life Sciences·DateApr 23, 2026

Hot spring microbiomes could transform industrial CO2 waste into valuable products, Manchester researchers find

Researchers at the University of Manchester have found that terrestrial hot spring microbiomes can transform industrial CO2 waste into biomass and other valuable compounds. This discovery could enable the production of value-added products directly from CO2-rich waste streams, reducing emissions while generating economic value.

SourceUniversity of Manchester·JournalEnvironmental Microbiome·DateApr 21, 2026