Articles tagged with Molecular Mapping
A KAIST research team has developed a new molecular system that can selectively switch the pathway through which electrons are transferred during oxygen activation. The findings provide a fundamental design principle for next-generation catalysts and energy-conversion technologies.
Huntington's disease is caused by a toxic protein that builds in brain cells and spreads to other cells through tunneling nanotubes. Disrupting this pathway reduces the spread of the disease-causing protein, suggesting a new target for therapy.
Scientists at Northwestern University have determined the three-dimensional structures of rye pollen's cancer-fighting molecules, secalosides A and B. This breakthrough opens the door to exploring how these molecules interact with the immune system and could inspire new approaches to cancer therapy.
Researchers uncover a key ion channel, TRPM4, that regulates intestinal fluid balance and identify a new druggable site. This discovery provides a blueprint for designing targeted treatments for gastrointestinal disorders.
A contemporary cohort study found a low risk of isolated locoregional recurrence (5.6%) at 10.1 years follow-up for young women diagnosed with breast cancer under 40. Surgical decision-making should not be influenced by concerns about long-term risk.
Researchers mapped a lung tumor's cellular neighborhoods in 3D using single-cell spatial technologies, identifying 18 cell types and potential targets for personalized cancer therapy. The study reveals new insights into how tumor cells interact with their surroundings and how to reverse immune suppression mechanisms.
Researchers have mapped the diversity of a globally important pea collection, revealing secrets behind Mendel's famous traits and uncovering agriculturally useful genetic diversity. The new set of gene bank and genomic resources could revolutionize pea breeding and research.
Dr. Romina Mizrahi's PET-based neuroimaging sheds light on brain workings, integrating genetics, environment and imaging to understand psychiatric illness as a complex biological puzzle. She advocates for precision psychiatry paradigm with customized treatments based on molecular profiles, and calls for diversity in academic leadership.
A new study maps how specific lactic acid bacteria can reduce off-flavours and degrade anti-nutrients in plant-based dairy alternatives. Fermentation with these bacterial strains increases nutrient bioavailability and enhances product nutritional profiles.
Researchers created a powerful new computational and artificial intelligence tool that can generate high-resolution 3D maps of the brain in mice, allowing users to zoom in and out and peer into the full set of molecules producing energy for brain functions. This breakthrough brings scientists closer to understanding the role of metabol...
Researchers have created an immune map for pancreatic cancer, showing why some tumours are more susceptible to macrophage-based therapies. The study identifies potential avenues for improved treatment approaches, including boosting certain cell responses and depleting suppressive immune cells.
A new study from the University of Southern Denmark reveals that the brain's self-healing abilities are hindered by inflammation after a stroke. The researchers mapped specific cells that play a central role in rebuilding myelin, but found gender differences in how men and women respond to injuries.
Researchers have developed a new X-ray technique called XL-DOT that visualizes crystal grains, grain boundaries, and defects in materials, enabling previously inaccessible insights into functional materials. The technique uses polarized X-rays to probe the orientation of structural domains in three dimensions.
Researchers at North Carolina State University developed a new method to visualize interfaces in organic solar cells, revealing design rules to improve efficiency. The study found that sharp donor-acceptor interfaces are key to reducing voltage losses.
Researchers at SFSU have created three-dimensional molecular and anatomical maps of the inner neuronal circuitry of octopus arms. These 3D reconstructions revealed that cells at the tip of an arm are different from those at the base, allowing for new questions to be posed about how cells communicate with one another.
Researchers at NYU Langone Health will use visible-light OCT technology to detect biomarkers of neurodegenerative disease, including Alzheimer’s and Parkinson’s diseases. The study aims to identify retinal layers and monitor the effects of therapies.
Researchers at Rice University have created a roadmap showing how proteins interact to form the nanometer-thin shell of gas vesicles. This breakthrough enables the development of medically useful GV varieties in the lab, which can be used for diagnostics and therapeutics.
The distribution of outermost shell electrons was experimentally observed in organic molecules, revealing a fragmented electron cloud distribution. This demonstrates the quantum mechanical wave nature of electrons and validates a theoretical model proposed by quantum chemistry.
A platform called Open-ST enables scientists to reconstruct gene expression in cells within a tissue in three dimensions, capturing molecular and (sub)cellular structures. The platform was used to study cell types at subcellular resolution in tissues from mice brains, tumor tissue, and healthy lymph nodes, providing insights into cance...
Researchers at EPFL have published an open-source project Tabulae Paralytica, providing a comprehensive understanding of spinal cord injury biology. The study identifies specific neurons and genes involved in recovery and proposes a successful gene therapy derived from its discoveries.
Engineers at the University of California San Diego used a new technique called MUSIC to map out interactions between chromatin and RNA in individual brain cells. The study found that some brain cells age faster and are more prevalent in individuals with Alzheimer's disease, particularly in women.
A team of Harvard researchers, led by Jeff Lichtman, has created the largest synaptic-resolution, 3D reconstruction of a piece of human brain to date. The dataset contains 1,400 terabytes of data on neural connections in a tiny piece of human temporal cortex.
Researchers have developed a new technique called molecular pixelation, which allows for the analysis of hundreds of proteins simultaneously in individual cells. This provides a more detailed picture of protein distribution and interactions, crucial for understanding cellular function and signaling.
A new atlas of early brain development has been created, allowing researchers to understand the genetic processes behind brain tumor formation in children. The study's findings may lead to new treatments for this rare but deadly disease.
Researchers at U of T have mapped the movement of proteins encoded by the yeast genome throughout its cell cycle, identifying patterns of emergence and disappearance or movement to specific areas. The study provides a unique dataset that offers a genome-scale view of molecular changes during cell division.
A comprehensive atlas of ageing human muscle reveals genetic and cellular processes behind muscle deterioration, including new cell populations that may explain age-related differences. The study also identifies compensatory mechanisms to counteract ageing, offering avenues for future therapies.
Researchers have mapped the protein composition of brain endothelial cells, revealing dysregulation of key molecules involved in cellular processes. This study provides a framework for understanding endothelial signaling pathways during aging and serves as a data basis for future analyses of brain endothelial function.
Researchers used mass spectrometry imaging and single-cell metabolomics with deep learning to create 3D molecular maps of the brain, enabling a better understanding of chemical interactions within brain tissue. This breakthrough could help address currently intractable neurological diseases.
Researchers define a 'core senescent profile' in human colon fibroblasts, revealing potential driver proteins involved in CRC. The study's findings provide insights into therapies for improving overall health and preventing CRC.
A systematic analysis of cancer cells identifies 370 candidate priority drug targets across 27 cancer types. Researchers used machine learning methods to find promising targets and linked them to specific biological markers and genetic features.
A large brain imaging study discovered reduced grey matter volume across nearly all brain regions in individuals with Early Onset Psychosis, a critical period of brain development. The study provides unprecedented levels of detail about the illness and may assist in future diagnosis and track treatment effects.
Researchers have mapped hundreds of pig genes and identified similarities with humans, shedding light on disease development and potential treatments. The study paves the way for targeted medicines and more precise gene editing in pigs.
A new study has identified three genes, MANBA, TNFRSF13B, and EEF1A1, as crucial in the regulation of IgG galactosylation, a trait associated with ageing. The research used GWAS to analyze IgG glycosylation phenotypes in a large sample size, increasing the understanding of this complex posttranslational modification.
Researchers have discovered that immune cells play a crucial role in directing the growth of human lung tissue during development, revolutionizing our understanding of early lung development. The findings also suggest that early immune disturbances could manifest as pediatric lung disease.
Gladstone scientists have created an intricate map of how the immune system functions, examining the detailed molecular structures governing human T cells. This study will accelerate the development of new and better therapies for cancer and autoimmune diseases.
Researchers at UVA Health System created an 'atlas of atherosclerosis' revealing critical processes that form harmful plaque buildup. The study provides unprecedented insights into atherosclerosis and its impact on coronary artery disease, heart attacks, and strokes.
Scientists unveiled a spatial cell atlas of the entire developing human limb, capturing intricate processes governing rapid development. The study uncovers new links between developmental cells and congenital limb syndromes, such as short fingers and extra digits.
Researchers have successfully mapped the entire HLA class II landscape, predicting how pathogens are displayed on cell surfaces. The mapping reveals that multiple HLA variants play essential roles in autoimmune disorders and organ rejection, highlighting their potential for developing immunotherapy treatments.
Tau protein forms nano-biomolecular condensates that dynamically cluster recycling synaptic vesicles, influencing synaptic function. This study highlights the importance of protein mapping in understanding neural transmission and synaptic plasticity.
Researchers at Tufts University developed a genome-scale metabolic model to identify potential new treatment targets for Lyme disease. The model successfully predicted two compounds that selectively target Lyme bacteria while leaving other helpful bacteria untouched.
A new approach allows researchers to create maps of coral biochemistry, detailing the distribution of compounds integral to reef health. This innovation provides unprecedented insight into coral resilience and potential stressors like warmer ocean temperatures and acidification.
A team of scientists has developed a method to detect thousands of lipid molecules displayed to T cells in the human immune system. The study reveals rules about lipid size, shape, and chemical content that influence T cell responses.
Scientists created a unique data process that provides valuable insights into how drugs are processed in the body and their impact on biochemical responses. The approach reveals detailed maps of drug transformation and allows for simultaneous discovery of fate and effects.
Researchers have created an ultra-high-resolution map of the intestine's cellular neighborhoods, revealing their function and organization. The study provides new insights into digestion, disease risk, and the relationship between body mass index and hypertension.
Researchers from Hokkaido University developed a centralized, interactive platform to explore and analyze chemical reaction pathways. The Searching Chemical Action and Network (SCAN) platform utilizes AFIR calculations to provide an interactive reaction pathway map that can be searched and viewed.
Researchers mapped receptor densities across the cortex, identifying two main arrangements that align with functional systems. The findings provide insights into how the brain adapts to a changing world, with potential applications for computational models and neuroscientific research.
Researchers developed Genome Architecture Mapping (GAM) to study DNA interactions, revealing novel three-dimensional configurations that were invisible to Hi-C. This technique provides a more comprehensive understanding of genome organization and its impact on health and disease.
The MOSAIC project will use cutting-edge spatial omics technologies to map cancer cells and their immune environment in high resolution. By analyzing thousands of patient samples, researchers aim to unlock novel cancer treatments and biomarkers through AI-powered analytics.
Cancer cells in brain tumors produce lipids at higher rates than surrounding healthy tissue, offering clues for treatment strategies. The study provides insights into the unique biochemical processes fueling cancer growth in the brain.
Scientists at Stockholm University propose a nonlinear spectroscopic technique to investigate coupled nuclear electronic dynamics in photo-excited molecules. This approach allows for the observation of conical intersections, which are 'funnels' connecting different electronic states, and provides insight into non-adiabatic dynamics.
Researchers have discovered a way to produce limonoids, a family of valuable chemicals with potential as bee-friendly insecticides and anti-cancer drugs. By identifying the enzymes required for production, they can now use host organisms to create these compounds in a more sustainable way.
A study by Tokyo Institute of Technology mapped how singlet oxygen molecules travel along DNA strands, shedding light on their propagation and oxidation patterns. The research could lead to more efficient and selective photosensitizer agents for targeted photodynamic therapy, a promising cancer treatment.
A team at Harvard Medical School has created large-scale 2D and 3D spatial maps of colorectal cancer, layering molecular information on top of histological features. The maps reveal the interconnectedness of traditional isolated structures in colorectal cancer, allowing researchers to explore differences within individual tumors.
Researchers at Cedars-Sinai have created a detailed molecular profile of endometriosis, identifying key differences between major subtypes and potential therapeutic targets. The new database will lead to improved care for millions of women suffering from the disease.
Researchers developed a computational protocol called MACH that can quickly determine whether a given compound will form a crystal hydrate. The tool uses rules to systematically determine where water would likely be inserted into a crystal, providing essential knowledge for drug development and formulation.
A team of scientists has identified over 200 direct protein-protein contacts between the SARS-CoV-2 virus and human cells, shedding light on the mechanisms underlying severe COVID-19. The study reveals chains of connections between viral proteins and infection-relevant human genes, with implications for disease severity and treatment.
Scientists have developed a method to control chemical reactions in a single molecule by applying voltage pulses, resulting in unprecedented selectivity. By fine-tuning the voltage, researchers can interconvert different products formed during the reaction.
A new study reveals a previously unrecognized level of heterogeneity and specialization of endothelial and mesenchymal cells in the bone marrow. By integrating single-cell gene expression data, researchers identified 14 endothelial and 11 mesenchymal subclusters, providing insights into blood stem cell self-renewal and differentiation
Researchers have constructed a comprehensive map of CLL genetic changes, providing a better understanding of the complex malignancy. The study identifies key genes and subtypes with distinct prognoses, paving the way for more accurate diagnoses and personalized treatments.
A team of scientists has developed a single-cell map of the human heart, identifying molecular alterations in failing hearts at unprecedented resolution. This breakthrough uses Cripsr technology to profile human tissue samples, revealing novel therapeutic targets for heart failure and other cardiovascular diseases.