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Molecular Tumor Board provides useful assist in cancer precision medicine

A multidisciplinary team reviews genomic test results and recommends treatment options for patients with gastrointestinal cancer, identifying clinical trials suitable for most patients. The program has been successful in providing expert treatment guidance for over 500 patients and can be a model for other cancer centers.

SourceDana-Farber Cancer Institute·JournalJCO Precision Oncology·TypeSystematic review·DateJan 12, 2023

Large-scale study led by Fred Hutch finds new genetic risk factors for colorectal cancer, paving the way for better screening, prevention

A comprehensive analysis of over 100,000 colorectal cancer cases identified 100 new genetic risk factors strongly linked with the disease. These findings could help clinicians determine who's at highest risk for early detection and potentially identify candidates for preventive treatments.

SourceFred Hutchinson Cancer Center·JournalNature Genetics·TypeMeta-analysis·DateDec 20, 2022

Immune system of modern Papuans shaped by DNA from ancient Denisovans

A recent study found that Denisovan DNA sequences near immune-related genes in modern Papuans regulate their activity, affecting how people respond to infections. The research suggests that Denisovan DNA contributed to the adaptation of early modern humans living in New Guinea and nearby islands.

SourcePLOS·JournalPLOS ONE·TypeObservational study·DateDec 8, 2022

Jawbone may represent earliest presence of humans in Europe

A new analysis of a 45,000-65,000 year old fossil mandible from Spain suggests it may be the earliest documented presence of Homo sapiens in Europe, rather than a Neandertal. The study used CT scanning and 3D modeling to analyze the fossil's shape and features, finding that it shared characteristics with both humans and Neandertals.

SourceBinghamton University·JournalJournal of Human Evolution·TypeImaging analysis·DateDec 6, 2022

Meet Squeegee: A new contamination detection tool for low microbial biomass microbiomes

Researchers at Baylor College of Medicine and Rice University developed a new contamination detection tool called Squeegee to establish reproducibility in microbiome identification. The tool uses computer analysis to detect 'breadcrumbs' of contaminants, improving the accuracy of metagenomic sequencing analysis in low biomass studies.

SourceBaylor College of Medicine·JournalNature Communications·TypeComputational simulation/modeling·DateDec 6, 2022

Finding the right AI for you

A new AI evaluation framework, GOPHER, has been developed to assess the efficiency of genome analysis algorithms. The tool judges programs on their ability to learn genomic biology, predict patterns, handle noise, and provide interpretable decisions.

SourceCold Spring Harbor Laboratory·JournalNature Machine Intelligence·DateDec 5, 2022

When FMD hits a family, abdominal aortic aneurysms may too

Researchers discover a shared genetic basis between fibromuscular dysplasia (FMD) and abdominal aortic aneurysms (AAA), with males more likely to develop AAA when a family member has FMD. The study suggests that screening for AAA in male relatives of patients with FMD may be beneficial, along with established guidelines.

SourceMichigan Medicine - University of Michigan·JournalCirculation Genomic and Precision Medicine·TypeData/statistical analysis·DateDec 1, 2022

Increasing crop yields by breeding plants to cooperate

A simple breeding experiment identified genes that promote cooperation and higher yields in plant populations. Plants with specific alleles were found to produce 15% more biomass when grown in close proximity, while reducing root competition.

SourcePLOS·JournalPLOS Biology·TypeExperimental study·DateNov 29, 2022

Cervical cancer discovery offers major new clue to better understand the disease

Researchers have identified two distinct molecular subgroups of cervical cancer, C1 and C2, which differ in their clinical aggressiveness and response to treatment. The study suggests that determining the subgroup of a patient's cervical cancer could provide additional prognostic information for planning treatment.

SourceUniversity College London·JournalNature Communications·TypeObservational study·DateOct 21, 2022

Alligators exposed to PFAS show autoimmune effects

A recent study found that alligators in the Cape Fear River basin have elevated levels of PFAS chemicals in their blood serum, leading to clinical and genetic indicators of immune system effects. The research team detected a significant association between PFAS exposure and autoimmune-like phenotypes in the affected alligators.

SourceNorth Carolina State University·JournalFrontiers in Toxicology·TypeObservational study·DateOct 20, 2022

Climate change could make High Arctic fertile ground for emerging pandemics: uOttawa study

A novel genetic analysis by University of Ottawa researchers reveals that climate change could lead to an increased risk of viral spillover in the High Arctic. This increased risk may result in new viruses infecting previously uninfected hosts, potentially leading to emerging pandemics.

SourceUniversity of Ottawa·JournalProceedings of the Royal Society B Biological Sciences·TypeComputational simulation/modeling·DateOct 19, 2022

Genetic defects lead to enamel malformations

A study conducted at the University of Zurich has identified a key gene network responsible for severe tooth enamel defects. The researchers found that mutations in the Adam10 molecule lead to disorganization of ameloblasts and severe defects in both structure and mineral composition of enamel.

SourceUniversity of Zurich·JournaliScience·TypeExperimental study·DateSep 26, 2022

Scientists at the CNIC and Hospital Puerta de Hierro develop a tool to determine if dilated cardiomyopathy has a genetic origin

A new software application predicts the likelihood that a case of dilated cardiomyopathy has a genetic mutation. The Madrid Genotype Score identifies patients most likely to have inherited the disease, facilitating genetic screening and tailored treatment adjustments.

SourceCentro Nacional de Investigaciones Cardiovasculares Carlos III (F.S.P.)·JournalJournal of the American College of Cardiology·TypeRandomized controlled/clinical trial·DateSep 12, 2022

Researchers propose new framework for regulating engineered crops

Researchers suggest a new approach for regulating genetically engineered (GE) crops by examining the specific characteristics of the crop itself. The '-omics' methods can be used to scan new crop varieties for unexpected DNA changes, eliminating the need for safety testing if the product is substantially equivalent to existing varieties.

SourceNorth Carolina State University·JournalScience·TypeCommentary/editorial·DateSep 1, 2022

Study reveals molecular brain changes linked to APOE4, the main susceptibility gene for Alzheimer’s disease

A new study from USC researchers uncovers the sequence of early molecular changes caused by APOE4, a discovery that may help identify potential treatment targets in the brain's blood vessels. The research reveals problems with the blood-brain barrier and synapses, leading to behavioral deficits and cognitive dysfunction.

SourceKeck School of Medicine of USC·JournalJournal of Experimental Medicine·TypeExperimental study·DateAug 30, 2022

Tracking the journey of mangroves in southern Japan

A study by OIST Graduate University's Marine Biophysics Unit found that mangroves in the Ryukyu Islands have limited connectivity, making it crucial to protect isolated forests. The research used genetics and oceanography to track propagule dispersal, revealing rare genetic exchanges between islands.

SourceOkinawa Institute of Science and Technology (OIST) Graduate University·JournalFrontiers in Marine Science·TypeObservational study·DateAug 24, 2022

People with similar faces likely have similar DNA

A study found that genetically unrelated individuals with extreme facial similarities share common genetic variants, but differ in epigenetic and microbiome landscapes. The results suggest a molecular basis for human resemblance, with potential implications in forensics and biomedicine.

SourceCell Press·JournalCell Reports·TypeExperimental study·DateAug 23, 2022

Scientists create a DNA test that identifies Lyme disease in horses

A Rutgers scientist has developed a highly sensitive DNA test that can detect Lyme disease in horses, a condition that can cause long-term complications. The test, called genomic hybrid capture assay, was tested on a sick horse and successfully identified the pathogen, allowing for early diagnosis and treatment.

SourceRutgers University·JournalJournal of Veterinary Diagnostic Investigation·TypeExperimental study·DateAug 17, 2022

New antibiotic resistance genes identified in tuberculosis

A massive analysis of over 10,000 Mycobacterium tuberculosis isolates revealed new genes associated with resistance to 13 antibiotics. The study provides a comprehensive framework for understanding the genetic mechanisms of resistance and identifying diagnostic gaps.

SourcePLOS·JournalPLOS Biology·TypeExperimental study·DateAug 9, 2022

Genetic findings offer opportunity for personalized heart failure treatment

Researchers discovered distinct genetic mutations in heart failure patients, identifying potential targets for personalized treatment and improving patient care. The study's findings hold enormous potential for rethinking how to treat heart failure by understanding its root causes and the mutations that lead to changes in heart function.

SourceBrigham and Women's Hospital·JournalScience·TypeExperimental study·DateAug 4, 2022