Articles tagged with Arabidopsis
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The APTES system uses deep learning models to automate the phenotypic analysis of individual leaves and siliques in Arabidopsis, achieving high precision and recall scores. The system's outputs enabled a genome-wide association study identifying significant associations with various traits.
Scientists at the University of Cambridge have developed a pioneering biosensor that can detect and track salicylic acid dynamics in living plants. The SalicS1 tool provides fresh insights into how plants coordinate local and systemic defenses against pathogens, with potential applications for improving crop resilience and understandin...
Researchers at Cold Spring Harbor Laboratory have mapped two known stem cell regulators across thousands of maize and Arabidopsis shoot cells. This discovery reveals new stem cell regulators in both species and links some to size variations in maize.
Researchers discovered that plants rapidly activate a coordinated immune response during drought recovery, prioritizing immunity over growth. This finding highlights the importance of studying the post-drought period and points to new strategies for engineering crops that can rebound more effectively after environmental stress.
Researchers create first genetic atlas to span entire Arabidopsis life cycle, capturing gene expression patterns of 400,000 cells in multiple developmental stages. The atlas provides comprehensive insights into plant biology, enabling future studies on different cell types and developmental stages.
Researchers at University of California San Diego discover itaconate stimulates seedling development, enhancing crop growth and potentially offering a sustainable solution for increasing food production. The study provides new insights into the molecule's role in plant physiology and its connections to animal biology.
Researchers at Osaka Metropolitan University found a mutant protein that helps plants fight mildew, but also accelerates leaf aging and yellowing. The discovery could contribute to crop yield improvement and sustainable agriculture.
A Kobe University study finds that a gene regulating root development in vascular plants is also essential for organ development in liverworts, demonstrating the evolutionary dynamic of co-opting. The RLF protein, involved in this process, interacts with others to clarify plant organ development evolution.
A new study reveals that plants prioritize water over gravity during drought conditions, suppressing gravitropism to become more hydrotropic. MIZ1 protein helps attenuate root gravitropism, enabling plants to search for water effectively.
Researchers found that At2-MMP is essential for suppressing abnormal cell division and preventing excessive proliferation in wounded Arabidopsis stems. Overexpression of At2-MMP restored normal wound healing processes.
A recent study discovered that COI1 proteins in maize balance growth and defense by degrading JAZ and DELLAs. This finding could lead to developing more resilient maize varieties. The research revealed an unexpected role of COI1 in regulating DELLA levels, enabling maize to thrive under hot and arid climates.
Researchers discovered that disrupting plant microbiomes can compromise a plant's immune system, leading to autoimmunity. Prebiotics could potentially support or reset the microbiome to maintain balance, reducing losses in food crops.
Researchers have discovered a dynamic cross-kingdom horizontal gene transfer between plants and bacteria, transferring 75 genes that enhance carbohydrate metabolism and hormone synthesis. This finding opens up exciting possibilities for biotechnological applications in agriculture.
Researchers at Salk Institute found that higher temperatures drain plants of important dietary nutrients like nitrogen and phosphorus, affecting their long-term sustainability. The study's findings will inform the engineering of climate-resilient crops to address global warming's impact on food production.
Researchers discovered IMA peptides facilitate iron transport to root nodules for nitrogen fixation in legume plants. These peptides maintain nitrogen homeostasis and regulate plant growth in response to increased nitrogen concentrations.
A recent study published in Nature Plants reveals that O-glycosylation of the transcription factor SPATULA promotes Arabidopsis style development. The experimental study sheds new light on the mechanisms underlying plant organ symmetry.
Plant populations in Cologne show great variation in life cycle characteristics, such as flowering and germination regulation, allowing them to adapt to local conditions. Environmental filtering plays a key role in selecting suitable genetic variants for survival.
Researchers at KAUST have isolated a desert microbial strain that enhances drought resilience in Arabidopsis and alfalfa, promoting water use efficiency without affecting crop yields. The microbes modify epigenetic status of drought stress genes and actively change plant root architecture.
A new study by Rice University bioscientists reveals how plant cells collaborate to fuel growth, shedding light on corresponding mechanisms in human cells. The findings focus on the role of enzyme MIEL1 and its human counterpart PIRH2 in breaking down protein coatings on lipid droplets.
A study by the University of Tsukuba found that changes in F1-hybrid metabolites lead to increased biomass in Arabidopsis plants. The researchers analyzed 202 Arabidopsis lines and found altered production of intermediate metabolites of the TCA cycle in high-heterosis combinations.
A study by John Innes Centre researchers has revealed how plants avoid cracking under stress by using a growth hormone called brassinosteroid to loosen the straitjacket effect on their skin. The findings, published in Science, have implications for our understanding of plant development and potentially improve crop yields.
Researchers found evidence for a modifier gene in sand cress that can lead to loss of self-incompatibility and acquisition of self-pollination. The study challenges current understanding of this process and opens up new avenues for research on plant breeding systems.
Scientists at the University of Münster have found a signaling pathway that protects plant stem cells in the root meristem from salt stress. The GSO1 receptor-like kinase helps transport sodium out of cells, preventing damage and promoting survival.
A study reveals a unique epigenetic biotimer mechanism controlling floral meristem termination and stamen development in Arabidopsis thaliana. The team discovered that AGAMOUS serves as a master conductor orchestrating gene expression through cell cycle-coupled H3K27me3 dilution.
Scientists at Tohoku University identified regulatory mechanisms in plants that utilize nitrogenous fertilizers, suggesting potential ways to generate crops with reduced fertilizer needs. The study focused on thale cress and aims to apply its findings to major crop plants like rice and cereals.
Scientists at UC Riverside identify microRNA as a key player in plant temperature responses and growth, revealing its essential role in sensing environmental changes. The discovery has significant implications for increasing crop yields in diverse environments and adapting to climate change.
A team of scientists identified a critical transcription factor, ANAC013, that plays a key role in the early response to hypoxia in plants. The discovery sheds light on the molecular mechanisms underlying plant adaptation to low oxygen conditions.
Researchers developed an image analysis algorithm that can automatically measure Arabidopsis thaliana stomatal aperture with high accuracy and speed. The technology also includes a portable imaging device for non-destructive observation using intact plants, allowing for rapid measurement of subtle changes in stomatal aperture.
A recent study using TurboID identified 39 new meiotic proteins in Arabidopsis thaliana, including both known and novel candidates. The research provides valuable insights into the genetic variation and plant reproduction processes.
New study reveals that diseased plant cells produce more proteins before dying, alerting healthy cells to boost immunity and prevent disease spread. This 'deathbed rally' helps the rest of the plant stay healthy, paving the way for potential disease resistance strategies.
Researchers found that SEUSS condensates rapidly form upon hyperosmotic stress, enabling Arabidopsis to tolerate salt and drought. Loss of SEU dramatically compromises stress-tolerance gene expression.
Researchers discovered a 'manganese-sensitive niche' in plant roots where calcium concentration oscillates in response to manganese deficiency. This process triggers the activation of two enzymes that stimulate manganese uptake and homeostasis.
A group of researchers from Nagoya University has discovered a previously unknown pathway that regulates whether a plant uses its resources for growth or stress tolerance. The discovery involves the PSY family of hormones, which bind to receptors and mediate the switch between the stress response and growth.
Researchers at NC State University have developed a reproducible method for studying cellular communication in plant cells using 3D bioprinting. The study found that more than half of the bioprinted cells were viable and divided over time, with soybean embryonic cells remaining viable for two weeks after bioprinting.
Researchers have identified four genes in corn and Arabidopsis that regulate root growth in response to gravity, a trait essential for drought tolerance and efficient water use. The study's approach, leveraging genomic comparisons between distantly related species, has the potential to be applied to other traits.
Researchers discovered that stressed plants produce salicylic acid, a protective hormone, to counteract stress caused by climate change. This discovery could help plants survive increasing stress and ultimately protect the food supply.
Researchers at the University of Florida have grown plants in soil from the Moon, a major milestone in lunar exploration. The study found that plants can sprout and grow in lunar regolith, but also experience stress due to its unique chemical composition.
Researchers at the University of Birmingham identified a new gene, Highlander, that regulates self-incompatibility in plants. The discovery opens up new avenues for improving crop yields and resistance to disease.
A new study explores how plants respond differently to useful and harmful microbes, revealing that accessory chromosomes from fungal strains dictate these responses. Most plant genes are expressed similarly in response to both beneficial and pathogenic fungi, but with key differences occurring just 12 hours after interaction.
Researchers have sequenced the Arabidopsis genome at unprecedented detail, shedding light on centromere evolution and revealing genetic and epigenetic topography. The findings provide insights into the genomic equivalent of black holes, a region that has long been challenging to analyze.
A team of scientists at Brookhaven National Laboratory has identified a key component of the assembly line responsible for oil droplet formation. The study suggests new ways to engineer plant tissues for increased oil accumulation, which could lead to sustainable oils for biofuels and other commodity products.
A recent study found that genome-wide association studies (GWAS) often miss important associations between genotype and phenotype due to high genetic heterogeneity, but examining smaller, genetically homogeneous samples yields valuable new insights
Researchers developed a method to profile gene expression in Arabidopsis embryos at the single cell level, overcoming obstacles that hindered previous attempts. This approach provides insights into transcription profiles within each cell, enabling the discovery of gene expression patterns that distinguish early embryonic cell types.
Researchers from The Pennsylvania State University have discovered a previously unreported structure called the 'cantil' in wild-type Arabidopsis thaliana. Cantils are rare structures that develop under specific conditions and provide important clues for understanding plant growth and development.
Researchers from Hokkaido University revealed a molecular mechanism for plant flowering under low-nitrogen conditions. The FBH4 protein, regulated by SnRK1 activity, controls gene expression essential for flowering and nitrogen recycling.
Phytochromes help plants detect light direction, intensity, and duration, as well as temperature, allowing them to adapt to various environments. The study fully characterized the phytochrome family in Arabidopsis thaliana and found surprising differences between isoforms.
Scientists have developed a solution that synergistically couples photorespiration and C4 metabolism in plants, conserving nitrogen and accumulating C4 metabolites. This breakthrough connects two main targets in plant metabolism and has the potential to improve agricultural productivity and climate resilience.
Researchers at Penn State have identified a gene controlling flowering in cacao, which may accelerate breeding efforts for disease-resistant trees. The Flowering Locus T gene's similarity to Arabidopsis' florigen protein suggests it can be used to develop new varieties with improved yields and quality traits.
Researchers discovered that the first frost triggers a molecular response in plants, called COOLAIR, which helps regulate flowering. This finding has implications for understanding how plants adapt to fluctuating temperatures and could lead to improved crop yields.
Researchers found that gene regulatory mechanisms at an early embryonic stage govern the flowering behavior of Arabidopsis later in development. The FLC transcript is antagonistically regulated by FCA and FRI, with FRI promoting longer and functional FLC protein levels.
Researchers at GMI discovered that Arabidopsis's Decreased DNA Methylation I (DDM1) gene product silences undesirable genetic elements and transposable elements, preventing genome instability. This mechanism dominates other known TE silencing mechanisms.
A study found that a single DNA base-pair change in a specific gene can influence whether a plant is a lark or night owl, affecting its flowering time and ability to withstand climate change. The research could help farmers select plants with clocks best suited to their location.
Researchers have discovered hidden subcompartments within peroxisomes, long thought to be simple granular matrices. These subcompartments may play a crucial role in the metabolism of fatty molecules and could hold key to understanding diseases like obesity and neurodegeneration.
Researchers found that Nicotiana promotes tissue adhesion and maintains grafts with a broad range of species. The study successfully grafted a tomato scion onto a Florist's daisy rootstock, producing a small fruit.
Researchers have identified a uniform genetic mechanism controlling seed position in plant pods, regardless of environmental factors. The study found that a specific peptide pair coordinates ovule initiation patterns with seed number and fruit size, leading to even spacing and optimal growth.
Researchers successfully promoted plant growth and increased seed yield by expressing high-speed-type myosin XI from Arabidopsis in Camelina sativa, a promising plant for biodiesel. This technology is expected to increase productivity per area unit and has potential applications in other plant species.
Research finds nanoplastics can accumulate in plants, depending on surface charge, impacting ecological effects and agricultural sustainability. Plant growth is reduced, with positively charged particles causing more harm than negatively charged ones, according to a new study.
Researchers at Nagoya University developed a micrografting device to facilitate the grafting of embryonic shoots onto tiny stalks, achieving a 48-88% success rate. The device shows potential for facilitating research into plant signalling and has been applied in tomato grafting.
A comprehensive map of the proteome of the model plant Arabidopsis thaliana has been created, detailing the presence, location, and quantity of approximately 18,000 proteins in the plant. This study provides new insights into plant biology and offers potential avenues for improving crop yields and disease resistance.
A zinc finger domain in Arabidopsis protein SIZ1 is essential for transcriptional regulation of genes required for abiotic stress responses, including cold, salt, and drought stresses. The domain's absence leads to impaired SIZ1 function, stunted plant growth, and increased sensitivity to stressful conditions.